RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 ZNF619Q8N2I2 560 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 SMYD1Q8NB12 490 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 FAM110BQ8TC76 370 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 ASB15Q8WXK1 588 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 DIO2Q92813 273 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 TAMM41Q96BW9 452 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 ZG16BQ96DA0 208 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 NSMCE2Q96MF7 247 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 ACTR3BQ9P1U1 418 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 MRTO4Q9UKD2 239 aaKnown RBP17.84■□□□□ 0.45
USP39-218ENST00000493829 SSUH2Q9Y2M2 353 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 CFAP47Q6ZTR5 3102 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 EXPH5Q8NEV8 1989 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 DSPPQ9NZW4 1301 aa17.84■□□□□ 0.45
USP39-218ENST00000493829 A0A0G2JPF8 293 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 HNRNPCL2B2RXH8 293 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 HNRNPCL3B7ZW38 293 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 TAF4O00268 1085 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 TSPAN2O60636 221 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 ICOSLGO75144 302 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 PPM1BO75688 479 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 SOX30O94993 753 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 UTS2O95399 124 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 HNRNPCL4P0DMR1 293 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 KDELR2P33947 212 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 DCTP40126 519 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.83■□□□□ 0.45
USP39-218ENST00000493829 H3F3CQ6NXT2 135 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 PROSER1Q86XN7 944 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 KRT73Q86Y46 540 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 TMEM156Q8N614 296 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 METTL25Q8N6Q8 603 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 SLC26A7Q8TE54 656 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 BCL2L10Q9HD36 194 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 YARS2Q9Y2Z4 477 aaKnown RBP17.83■□□□□ 0.45
USP39-218ENST00000493829 KCNMB2Q9Y691 235 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 DMXL2Q8TDJ6 3036 aa17.83■□□□□ 0.45
USP39-218ENST00000493829 M0QX08 132 aa17.83■□□□□ 0.44
USP39-218ENST00000493829 PSMD4P55036 377 aaKnown RBP17.83■□□□□ 0.44
USP39-218ENST00000493829 MEP1AQ16819 746 aa17.83■□□□□ 0.44
USP39-218ENST00000493829 GRAMD1BQ3KR37 738 aa17.83■□□□□ 0.44
USP39-218ENST00000493829 PDZK1Q5T2W1 519 aa17.83■□□□□ 0.44
USP39-218ENST00000493829 ZNF468Q5VIY5 522 aaPredicted RBP17.83■□□□□ 0.44
USP39-218ENST00000493829 LCN8Q6JVE9 175 aa17.83■□□□□ 0.44
USP39-218ENST00000493829 LYPD8Q6UX82 237 aa17.83■□□□□ 0.44
USP39-218ENST00000493829 IL20RBQ6UXL0 311 aa17.83■□□□□ 0.44
USP39-218ENST00000493829 PATL1Q86TB9 770 aaKnown RBP17.83■□□□□ 0.44
USP39-218ENST00000493829 SPATA24Q86W54 205 aa17.83■□□□□ 0.44
USP39-218ENST00000493829 VRK2Q86Y07 508 aa17.83■□□□□ 0.44
USP39-218ENST00000493829 ARMC8Q8IUR7 673 aa17.83■□□□□ 0.44
USP39-218ENST00000493829 TPD52L3Q96J77 140 aa17.83■□□□□ 0.44
USP39-218ENST00000493829 ZNF607Q96SK3 696 aa17.83■□□□□ 0.44
USP39-218ENST00000493829 TRIM15Q9C019 465 aa17.83■□□□□ 0.44
USP39-218ENST00000493829 MUC13Q9H3R2 512 aa17.83■□□□□ 0.44
USP39-218ENST00000493829 SEC14L3Q9UDX4 400 aa17.83■□□□□ 0.44
USP39-218ENST00000493829 KCNE5Q9UJ90 142 aa17.83■□□□□ 0.44
USP39-218ENST00000493829 ACACAQ13085 2346 aa17.82■□□□□ 0.44
USP39-218ENST00000493829 DOCK10Q96BY6 2186 aa17.82■□□□□ 0.44
USP39-218ENST00000493829 HS6ST1O60243 411 aa17.82■□□□□ 0.44
USP39-218ENST00000493829 ABCB7O75027 752 aa17.82■□□□□ 0.44
USP39-218ENST00000493829 PDE9AO76083 593 aa17.82■□□□□ 0.44
USP39-218ENST00000493829 FBXO45P0C2W1 286 aa17.82■□□□□ 0.44
USP39-218ENST00000493829 DMTNQ08495 405 aa17.82■□□□□ 0.44
USP39-218ENST00000493829 TRAP1Q12931 704 aaKnown RBP17.82■□□□□ 0.44
USP39-218ENST00000493829 MAPK14Q16539 360 aa17.82■□□□□ 0.44
USP39-218ENST00000493829 CYBRD1Q53TN4 286 aa17.82■□□□□ 0.44
USP39-218ENST00000493829 ABHD17BQ5VST6 288 aa17.82■□□□□ 0.44
USP39-218ENST00000493829 CCDC80Q76M96 950 aa17.82■□□□□ 0.44
USP39-218ENST00000493829 FAM86B1Q8N7N1 296 aa17.82■□□□□ 0.44
USP39-218ENST00000493829 GATSQ8NAP1 163 aa17.82■□□□□ 0.44
USP39-218ENST00000493829 OR10G3Q8NGC4 313 aa17.82■□□□□ 0.44
USP39-218ENST00000493829 OR4C3Q8NH37 302 aa17.82■□□□□ 0.44
USP39-218ENST00000493829 OR52P1PQ8NH57 321 aa17.82■□□□□ 0.44
USP39-218ENST00000493829 SPPL2AQ8TCT8 520 aa17.82■□□□□ 0.44
USP39-218ENST00000493829 SPACA9Q96E40 222 aaPredicted RBP17.82■□□□□ 0.44
USP39-218ENST00000493829 ZNF354BQ96LW1 612 aa17.82■□□□□ 0.44
USP39-218ENST00000493829 DENND2DQ9H6A0 471 aaPredicted RBP17.82■□□□□ 0.44
USP39-218ENST00000493829 CACYBPQ9HB71 228 aaKnown RBP17.82■□□□□ 0.44
USP39-218ENST00000493829 POLE3Q9NRF9 147 aa17.82■□□□□ 0.44
USP39-218ENST00000493829 TEKT2Q9UIF3 430 aa17.82■□□□□ 0.44
USP39-218ENST00000493829 GPC6Q9Y625 555 aaPredicted RBP17.82■□□□□ 0.44
USP39-218ENST00000493829 MED13Q9UHV7 2174 aa17.81■□□□□ 0.44
USP39-218ENST00000493829 CLDN24A6NM45 220 aa17.81■□□□□ 0.44
USP39-218ENST00000493829 UGT2B17O75795 530 aa17.81■□□□□ 0.44
USP39-218ENST00000493829 TMED10P49755 219 aaKnown RBP17.81■□□□□ 0.44
USP39-218ENST00000493829 TMPRSS3P57727 454 aa17.81■□□□□ 0.44
USP39-218ENST00000493829 PSPHP78330 225 aa17.81■□□□□ 0.44
USP39-218ENST00000493829 CCNIQ14094 377 aa17.81■□□□□ 0.44
USP39-218ENST00000493829 PRAMEF8Q5VWM4 474 aa17.81■□□□□ 0.44
USP39-218ENST00000493829 PRAMEF7Q5VXH5 474 aa17.81■□□□□ 0.44
USP39-218ENST00000493829 OPN5Q6U736 354 aa17.81■□□□□ 0.44
USP39-218ENST00000493829 ENPP6Q6UWR7 440 aa17.81■□□□□ 0.44
USP39-218ENST00000493829 PEX5LQ8IYB4 626 aa17.81■□□□□ 0.44
USP39-218ENST00000493829 FDCSPQ8NFU4 85 aa17.81■□□□□ 0.44
USP39-218ENST00000493829 GORASP2Q9H8Y8 452 aa17.81■□□□□ 0.44
USP39-218ENST00000493829 STMN3Q9NZ72 180 aa17.81■□□□□ 0.44
USP39-218ENST00000493829 ZNF451Q9Y4E5 1061 aa17.81■□□□□ 0.44
USP39-218ENST00000493829 CPAMD8Q8IZJ3 1885 aa17.81■□□□□ 0.44
USP39-218ENST00000493829 OR6C70A6NIJ9 312 aa17.8■□□□□ 0.44
USP39-218ENST00000493829 K7ENP7 123 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms