RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 MANBAO00462 879 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 PLOD2O00469 737 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 ZIC3O60481 467 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 TMCC2O75069 709 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 TNFRSF21O75509 655 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 TNFSF13O75888 250 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 ENO1P06733 434 aaKnown RBP8.27□□□□□ -1.09
HDAC3-212ENST00000492407 CT45A8P0DMV1 189 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 CT45A9P0DMV2 189 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 PCSK2P16519 638 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 TAC1P20366 129 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 FPR1P21462 350 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 MC3RP41968 323 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 AGFG1P52594 562 aaKnown RBP8.27□□□□□ -1.09
HDAC3-212ENST00000492407 BLVRAP53004 296 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 GAS1P54826 345 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 PKNOX1P55347 436 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 CLDN18P56856 261 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 CLCQ05315 142 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 EXOSC7Q15024 291 aaKnown RBP8.27□□□□□ -1.09
HDAC3-212ENST00000492407 CT45A2Q5DJT8 189 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 SGO1Q5FBB7 561 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 PPP4R4Q6NUP7 873 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 LETMD1Q6P1Q0 360 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 LARP4Q71RC2 724 aaKnown RBP eCLIP8.27□□□□□ -1.09
HDAC3-212ENST00000492407 CHMP1BQ7LBR1 199 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 NANOGNBQ7Z5D8 188 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 C1orf52Q8N6N3 182 aaKnown RBP8.27□□□□□ -1.09
HDAC3-212ENST00000492407 TRIML2Q8N7C3 387 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 ADCY4Q8NFM4 1077 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 TMBIM1Q969X1 311 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 INTS12Q96CB8 462 aaKnown RBP8.27□□□□□ -1.09
HDAC3-212ENST00000492407 MTBPQ96DY7 904 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 C11orf24Q96F05 449 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-212ENST00000492407 SFXN2Q96NB2 322 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 ZNF382Q96SR6 550 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 ADOQ96SZ5 270 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 PAFAH2Q99487 392 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 G6PC3Q9BUM1 346 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 GALNT9Q9HCQ5 603 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 FANCFQ9NPI8 374 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 FARSBQ9NSD9 589 aaKnown RBP8.27□□□□□ -1.09
HDAC3-212ENST00000492407 ZNF226Q9NYT6 803 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 ZNF225Q9UK10 706 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 MRTO4Q9UKD2 239 aaKnown RBP8.27□□□□□ -1.09
HDAC3-212ENST00000492407 GRID1Q9ULK0 1009 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 GTF2A1LQ9UNN4 478 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 ABCG2Q9UNQ0 655 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 MAPRE3Q9UPY8 281 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 ZNF175Q9Y473 711 aa8.27□□□□□ -1.09
HDAC3-212ENST00000492407 ARHGAP21Q5T5U3 1957 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 HRNRQ86YZ3 2850 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-212ENST00000492407 A0A1B0GTL3 188 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 ESYT3A0FGR9 886 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 A8MT66 165 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 LSM1O15116 133 aaKnown RBP8.26□□□□□ -1.09
HDAC3-212ENST00000492407 EMC8O43402 210 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 ESRRBO95718 433 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 PAHP00439 452 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 SNRPAP09012 282 aaKnown RBP8.26□□□□□ -1.09
HDAC3-212ENST00000492407 INHBBP09529 407 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 SBK3P0C264 359 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 CD8BP10966 210 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 IMPDH1P20839 514 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 GRK2P25098 689 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 DPP4P27487 766 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 IL12BP29460 328 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 CD79BP40259 229 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 ALDH9A1P49189 494 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 CLK3P49761 638 aaKnown RBP8.26□□□□□ -1.09
HDAC3-212ENST00000492407 PSMD4P55036 377 aaKnown RBP8.26□□□□□ -1.09
HDAC3-212ENST00000492407 CDH13P55290 713 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 NKX6-1P78426 367 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-212ENST00000492407 MRPS35P82673 323 aaKnown RBP8.26□□□□□ -1.09
HDAC3-212ENST00000492407 SRYQ05066 204 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 DUSP2Q05923 314 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 ACSM2AQ08AH3 577 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 TRAP1Q12931 704 aaKnown RBP8.26□□□□□ -1.09
HDAC3-212ENST00000492407 NNATQ16517 81 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 WHAMMP3Q1A5X7 153 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 KRT71Q3SY84 523 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 GLE1Q53GS7 698 aaKnown RBP8.26□□□□□ -1.09
HDAC3-212ENST00000492407 ZNF678Q5SXM1 525 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 ACSM2BQ68CK6 577 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 PLBD1Q6P4A8 553 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 C16orf54Q6UWD8 224 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 LUZP2Q86TE4 346 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 CXorf67Q86X51 503 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-212ENST00000492407 GRAMD2AQ8IUY3 354 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 SLC22A9Q8IVM8 553 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 CCDC116Q8IYX3 515 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 FAM9CQ8IZT9 166 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 MMGT1Q8N4V1 131 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 MEIOBQ8N635 442 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 FADS6Q8N9I5 356 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 WFDC11Q8NEX6 87 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 METTL6Q8TCB7 284 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 DCAKDQ8WVC6 231 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 CAVIN3Q969G5 261 aa8.26□□□□□ -1.09
HDAC3-212ENST00000492407 STARD4Q96DR4 205 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms