RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 DDX5P17844 614 aaKnown RBP22.43■■□□□ 1.18
UPF3A-209ENST00000492270 CASP8Q14790 479 aa22.43■■□□□ 1.18
UPF3A-209ENST00000492270 DUSP5Q16690 384 aa22.43■■□□□ 1.18
UPF3A-209ENST00000492270 SMU1Q2TAY7 513 aa22.43■■□□□ 1.18
UPF3A-209ENST00000492270 ACSF3Q4G176 576 aaPredicted RBP22.43■■□□□ 1.18
UPF3A-209ENST00000492270 WDYHV1Q96HA8 205 aa22.43■■□□□ 1.18
UPF3A-209ENST00000492270 FAM120CQ9NX05 1096 aaKnown RBP22.43■■□□□ 1.18
UPF3A-209ENST00000492270 DKKL1Q9UK85 242 aa22.43■■□□□ 1.18
UPF3A-209ENST00000492270 MRTO4Q9UKD2 239 aaKnown RBP22.43■■□□□ 1.18
UPF3A-209ENST00000492270 ABCG2Q9UNQ0 655 aa22.43■■□□□ 1.18
UPF3A-209ENST00000492270 FBN2P35556 2912 aa22.43■■□□□ 1.18
UPF3A-209ENST00000492270 APCP25054 2843 aa22.42■■□□□ 1.18
UPF3A-209ENST00000492270 TOXO94900 526 aa22.42■■□□□ 1.18
UPF3A-209ENST00000492270 HOXD4P09016 255 aaPredicted RBP22.42■■□□□ 1.18
UPF3A-209ENST00000492270 COX6B1P14854 86 aa22.42■■□□□ 1.18
UPF3A-209ENST00000492270 SRD5A2P31213 254 aa22.42■■□□□ 1.18
UPF3A-209ENST00000492270 CLDN8P56748 225 aa22.42■■□□□ 1.18
UPF3A-209ENST00000492270 PRR5P85299 388 aa22.42■■□□□ 1.18
UPF3A-209ENST00000492270 GRAMD1BQ3KR37 738 aa22.42■■□□□ 1.18
UPF3A-209ENST00000492270 VPS26BQ4G0F5 336 aa22.42■■□□□ 1.18
UPF3A-209ENST00000492270 EXOSC6Q5RKV6 272 aaKnown RBP22.42■■□□□ 1.18
UPF3A-209ENST00000492270 ZAR1Q86SH2 424 aa22.42■■□□□ 1.18
UPF3A-209ENST00000492270 MARCH3Q86UD3 253 aa22.42■■□□□ 1.18
UPF3A-209ENST00000492270 LIX1LQ8IVB5 337 aa22.42■■□□□ 1.18
UPF3A-209ENST00000492270 MCEMP1Q8IX19 187 aa22.42■■□□□ 1.18
UPF3A-209ENST00000492270 OR4K17Q8NGC6 315 aa22.42■■□□□ 1.18
UPF3A-209ENST00000492270 OR5P2Q8WZ92 322 aa22.42■■□□□ 1.18
UPF3A-209ENST00000492270 JADE3Q92613 823 aa22.42■■□□□ 1.18
UPF3A-209ENST00000492270 DUSP26Q9BV47 211 aa22.42■■□□□ 1.18
UPF3A-209ENST00000492270 DSN1Q9H410 356 aa22.42■■□□□ 1.18
UPF3A-209ENST00000492270 FBXO34Q9NWN3 711 aa22.42■■□□□ 1.18
UPF3A-209ENST00000492270 TAS2R10Q9NYW0 307 aa22.42■■□□□ 1.18
UPF3A-209ENST00000492270 ABCA12Q86UK0 2595 aa22.41■■□□□ 1.18
UPF3A-209ENST00000492270 AHRRA9YTQ3 701 aa22.41■■□□□ 1.18
UPF3A-209ENST00000492270 HMGN2P05204 90 aaKnown RBP22.41■■□□□ 1.18
UPF3A-209ENST00000492270 PTGER4P35408 488 aa22.41■■□□□ 1.18
UPF3A-209ENST00000492270 ZFP36L2P47974 494 aaKnown RBP22.41■■□□□ 1.18
UPF3A-209ENST00000492270 PSMD4P55036 377 aaKnown RBP22.41■■□□□ 1.18
UPF3A-209ENST00000492270 GFRA1P56159 465 aa22.41■■□□□ 1.18
UPF3A-209ENST00000492270 C21orf58P58505 322 aa22.41■■□□□ 1.18
UPF3A-209ENST00000492270 TFF3Q07654 80 aa22.41■■□□□ 1.18
UPF3A-209ENST00000492270 LASP1Q14847 261 aaKnown RBP22.41■■□□□ 1.18
UPF3A-209ENST00000492270 PGS1Q32NB8 556 aa22.41■■□□□ 1.18
UPF3A-209ENST00000492270 FIGNL1Q6PIW4 674 aa22.41■■□□□ 1.18
UPF3A-209ENST00000492270 APOOLQ6UXV4 268 aa22.41■■□□□ 1.18
UPF3A-209ENST00000492270 IFNEQ86WN2 208 aa22.41■■□□□ 1.18
UPF3A-209ENST00000492270 PM20D2Q8IYS1 436 aa22.41■■□□□ 1.18
UPF3A-209ENST00000492270 FADS6Q8N9I5 356 aa22.41■■□□□ 1.18
UPF3A-209ENST00000492270 PSMA8Q8TAA3 256 aa22.41■■□□□ 1.18
UPF3A-209ENST00000492270 PRPF18Q99633 342 aaKnown RBP22.41■■□□□ 1.18
UPF3A-209ENST00000492270 BHLHE41Q9C0J9 482 aaPredicted RBP22.41■■□□□ 1.18
UPF3A-209ENST00000492270 MEAF6Q9HAF1 191 aa22.41■■□□□ 1.18
UPF3A-209ENST00000492270 MED11Q9P086 117 aa22.41■■□□□ 1.18
UPF3A-209ENST00000492270 RPH3AQ9Y2J0 694 aaPredicted RBP22.41■■□□□ 1.18
UPF3A-209ENST00000492270 LRBAP50851 2863 aa22.41■■□□□ 1.18
UPF3A-209ENST00000492270 SNNO75324 88 aaPredicted RBP22.4■■□□□ 1.18
UPF3A-209ENST00000492270 KCNK2O95069 426 aa22.4■■□□□ 1.18
UPF3A-209ENST00000492270 ACTL6AO96019 429 aa22.4■■□□□ 1.18
UPF3A-209ENST00000492270 ALOX5P09917 674 aa22.4■■□□□ 1.18
UPF3A-209ENST00000492270 DPP4P27487 766 aa22.4■■□□□ 1.18
UPF3A-209ENST00000492270 CCT3P49368 545 aaKnown RBP22.4■■□□□ 1.18
UPF3A-209ENST00000492270 STARP49675 285 aa22.4■■□□□ 1.18
UPF3A-209ENST00000492270 SLC18A1P54219 525 aa22.4■■□□□ 1.18
UPF3A-209ENST00000492270 TP53BP2Q13625 1128 aa22.4■■□□□ 1.18
UPF3A-209ENST00000492270 CCNJQ5T5M9 372 aa22.4■■□□□ 1.18
UPF3A-209ENST00000492270 RIPPLY2Q5TAB7 128 aa22.4■■□□□ 1.18
UPF3A-209ENST00000492270 OR4F3Q6IEY1 312 aa22.4■■□□□ 1.18
UPF3A-209ENST00000492270 CAMKMTQ7Z624 323 aa22.4■■□□□ 1.18
UPF3A-209ENST00000492270 TRIM42Q8IWZ5 723 aa22.4■■□□□ 1.18
UPF3A-209ENST00000492270 CLECL1Q8IZS7 167 aa22.4■■□□□ 1.18
UPF3A-209ENST00000492270 NAXEQ8NCW5 288 aa22.4■■□□□ 1.18
UPF3A-209ENST00000492270 TNIP2Q8NFZ5 429 aa22.4■■□□□ 1.18
UPF3A-209ENST00000492270 OR2M3Q8NG83 312 aa22.4■■□□□ 1.18
UPF3A-209ENST00000492270 OR5AK3PQ8NH89 298 aa22.4■■□□□ 1.18
UPF3A-209ENST00000492270 ARL8AQ96BM9 186 aa22.4■■□□□ 1.18
UPF3A-209ENST00000492270 NPDC1Q9NQX5 325 aaPredicted RBP22.4■■□□□ 1.18
UPF3A-209ENST00000492270 NKIRAS1Q9NYS0 192 aa22.4■■□□□ 1.18
UPF3A-209ENST00000492270 MARCOQ9UEW3 520 aaPredicted RBP22.4■■□□□ 1.18
UPF3A-209ENST00000492270 MED12LQ86YW9 2145 aa22.4■■□□□ 1.18
UPF3A-209ENST00000492270 SDHDO14521 159 aa22.39■■□□□ 1.17
UPF3A-209ENST00000492270 CFLARO15519 480 aa22.39■■□□□ 1.17
UPF3A-209ENST00000492270 ZIC3O60481 467 aa22.39■■□□□ 1.17
UPF3A-209ENST00000492270 EPPINO95925 133 aa22.39■■□□□ 1.17
UPF3A-209ENST00000492270 PRIM2P49643 509 aa22.39■■□□□ 1.17
UPF3A-209ENST00000492270 HBA1P69905 142 aa22.39■■□□□ 1.17
UPF3A-209ENST00000492270 LSM12Q3MHD2 195 aaKnown RBP22.39■■□□□ 1.17
UPF3A-209ENST00000492270 SPDYE7PQ495Y7 208 aa22.39■■□□□ 1.17
UPF3A-209ENST00000492270 ZCCHC12Q6PEW1 402 aa22.39■■□□□ 1.17
UPF3A-209ENST00000492270 KIRREL3Q8IZU9 778 aa22.39■■□□□ 1.17
UPF3A-209ENST00000492270 NATD1Q8N6N6 113 aa22.39■■□□□ 1.17
UPF3A-209ENST00000492270 COX18Q8N8Q8 333 aa22.39■■□□□ 1.17
UPF3A-209ENST00000492270 FAM110BQ8TC76 370 aa22.39■■□□□ 1.17
UPF3A-209ENST00000492270 CDS1Q92903 461 aa22.39■■□□□ 1.17
UPF3A-209ENST00000492270 CHMP6Q96FZ7 201 aa22.39■■□□□ 1.17
UPF3A-209ENST00000492270 TRIB1Q96RU8 372 aa22.39■■□□□ 1.17
UPF3A-209ENST00000492270 TBL1XR1Q9BZK7 514 aa22.39■■□□□ 1.17
UPF3A-209ENST00000492270 KCNJ16Q9NPI9 418 aa22.39■■□□□ 1.17
UPF3A-209ENST00000492270 THAP1Q9NVV9 213 aa22.39■■□□□ 1.17
UPF3A-209ENST00000492270 ANGPTL1O95841 491 aa22.38■■□□□ 1.17
UPF3A-209ENST00000492270 ALDOCP09972 364 aaKnown RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms