RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 EXOC3L1Q86VI1 746 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 FADS6Q8N9I5 356 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 FNDC5Q8NAU1 212 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 OR6Y1Q8NGX8 325 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 CEP70Q8NHQ1 597 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 MS4A4EQ96PG1 132 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 CALHM2Q9HA72 323 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 SDHAF3Q9NRP4 125 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 ACSS1Q9NUB1 689 aaPredicted RBP13.6□□□□□ -0.23
TOM1-215ENST00000491987 MED11Q9P086 117 aa13.6□□□□□ -0.23
TOM1-215ENST00000491987 ZNF629Q9UEG4 869 aaPredicted RBP13.6□□□□□ -0.23
TOM1-215ENST00000491987 MRPS18CQ9Y3D5 142 aaKnown RBP13.6□□□□□ -0.23
TOM1-215ENST00000491987 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 CLCA1A8K7I4 914 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 EMC8O43402 210 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 ZIC3O60481 467 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 LYPLA1O75608 230 aaPredicted RBP13.59□□□□□ -0.23
TOM1-215ENST00000491987 UTS2O95399 124 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 HSPA4LO95757 839 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 ACP2P11117 423 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 CAPN3P20807 821 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 CHMP24386 653 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 SERPINB4P48594 390 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 CLK3P49761 638 aaKnown RBP13.59□□□□□ -0.23
TOM1-215ENST00000491987 DSCR4P56555 118 aaPredicted RBP13.59□□□□□ -0.23
TOM1-215ENST00000491987 B3GALT5-AS1P59052 145 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 PTGR1Q14914 329 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 C6orf136Q5SQH8 315 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 IL23RQ5VWK5 629 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 LRIG3Q6UXM1 1119 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 GALNT10Q86SR1 603 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 CDH24Q86UP0 819 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 TMEM200AQ86VY9 491 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 CDRT4Q8N9R6 151 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 OR7A2PQ8NGA2 310 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 DUSP19Q8WTR2 217 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 RNASE6Q93091 150 aaKnown RBP13.59□□□□□ -0.23
TOM1-215ENST00000491987 GIMAP5Q96F15 307 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 OTUB1Q96FW1 271 aaPredicted RBP13.59□□□□□ -0.23
TOM1-215ENST00000491987 SH3GL2Q99962 352 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 G6PC3Q9BUM1 346 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 TBL1XR1Q9BZK7 514 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 CENPHQ9H3R5 247 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 SLC24A3Q9HC58 644 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 ATP6V1HQ9UI12 483 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 ITGB1BP2Q9UKP3 347 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 PDZD2O15018 2839 aa13.59□□□□□ -0.23
TOM1-215ENST00000491987 A0A1W2PRB8 838 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 EEF1E1-BLOC1S5C9J1V9 151 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 EEF1E1O43324 174 aaKnown RBP13.58□□□□□ -0.24
TOM1-215ENST00000491987 ITM2AO43736 263 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 GMFGO60234 142 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 TMIGD3P0DMS9 266 aaPredicted RBP13.58□□□□□ -0.24
TOM1-215ENST00000491987 ZNF708P17019 499 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 DDX5P17844 614 aaKnown RBP13.58□□□□□ -0.24
TOM1-215ENST00000491987 HK1P19367 917 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 CTSSP25774 331 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 RPL3P39023 403 aaKnown RBP13.58□□□□□ -0.24
TOM1-215ENST00000491987 MAP3K8P41279 467 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 CLDN18P56856 261 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 FOXF2Q12947 444 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 DUSP5Q16690 384 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 GRAMD1BQ3KR37 738 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 RAET1LQ5VY80 246 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 MFSD12Q6NUT3 480 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 FIGNL1Q6PIW4 674 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 APOOLQ6UXV4 268 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 UBQLNLQ8IYU4 475 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 SLC16A11Q8NCK7 471 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 NUDT8Q8WV74 236 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 JADE3Q92613 823 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 HOXB13Q92826 284 aaPredicted RBP13.58□□□□□ -0.24
TOM1-215ENST00000491987 TUBGCP3Q96CW5 907 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 FAM120BQ96EK7 910 aaKnown RBP13.58□□□□□ -0.24
TOM1-215ENST00000491987 LRRC46Q96FV0 321 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 C16orf58Q96GQ5 468 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 YIPF4Q9BSR8 244 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 ZNF395Q9H8N7 513 aaPredicted RBP13.58□□□□□ -0.24
TOM1-215ENST00000491987 SIRT3Q9NTG7 399 aaPredicted RBP13.58□□□□□ -0.24
TOM1-215ENST00000491987 NTMQ9P121 344 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 RAB21Q9UL25 225 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 DCHS2Q6V1P9 2916 aa13.58□□□□□ -0.24
TOM1-215ENST00000491987 SYT5O00445 386 aa13.57□□□□□ -0.24
TOM1-215ENST00000491987 ZWINTO95229 277 aa13.57□□□□□ -0.24
TOM1-215ENST00000491987 ANGPTL1O95841 491 aa13.57□□□□□ -0.24
TOM1-215ENST00000491987 SERPINE1P05121 402 aa13.57□□□□□ -0.24
TOM1-215ENST00000491987 LAMP1P11279 417 aa13.57□□□□□ -0.24
TOM1-215ENST00000491987 OPRM1P35372 400 aa13.57□□□□□ -0.24
TOM1-215ENST00000491987 KIR2DL3P43628 341 aa13.57□□□□□ -0.24
TOM1-215ENST00000491987 PRIM2P49643 509 aa13.57□□□□□ -0.24
TOM1-215ENST00000491987 PRR5P85299 388 aa13.57□□□□□ -0.24
TOM1-215ENST00000491987 MLC1Q15049 377 aa13.57□□□□□ -0.24
TOM1-215ENST00000491987 CHI3L2Q15782 390 aa13.57□□□□□ -0.24
TOM1-215ENST00000491987 PDCD2Q16342 344 aaPredicted RBP13.57□□□□□ -0.24
TOM1-215ENST00000491987 FBXL19-AS1Q494R0 122 aa13.57□□□□□ -0.24
TOM1-215ENST00000491987 CEP85LQ5SZL2 805 aa13.57□□□□□ -0.24
TOM1-215ENST00000491987 ADGRE4PQ86SQ3 457 aa13.57□□□□□ -0.24
TOM1-215ENST00000491987 ZZZ3Q8IYH5 903 aa13.57□□□□□ -0.24
TOM1-215ENST00000491987 KRTCAP2Q8N6L1 136 aa13.57□□□□□ -0.24
TOM1-215ENST00000491987 ZNF781Q8N8C0 355 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms