RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, human

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS72-205	ENST00000491094	FAM209A	Q5JX71	171 aa		10.45	□□□□□ -0.74
VPS72-205	ENST00000491094	C1orf94	Q6P1W5	598 aa		10.45	□□□□□ -0.74
VPS72-205	ENST00000491094	LCTL	Q6UWM7	567 aa		10.45	□□□□□ -0.74
VPS72-205	ENST00000491094	LRRC17	Q8N6Y2	441 aa		10.45	□□□□□ -0.74
VPS72-205	ENST00000491094	ACOT4	Q8N9L9	421 aa		10.45	□□□□□ -0.74
VPS72-205	ENST00000491094	MORN4	Q8NDC4	146 aa		10.45	□□□□□ -0.74
VPS72-205	ENST00000491094	ORAI1	Q96D31	301 aa		10.45	□□□□□ -0.74
VPS72-205	ENST00000491094	RNF170	Q96K19	258 aa		10.45	□□□□□ -0.74
VPS72-205	ENST00000491094	ARHGAP9	Q9BRR9	750 aa		10.45	□□□□□ -0.74
VPS72-205	ENST00000491094	SLC28A3	Q9HAS3	691 aa		10.45	□□□□□ -0.74
VPS72-205	ENST00000491094	ICK	Q9UPZ9	632 aa		10.45	□□□□□ -0.74
VPS72-205	ENST00000491094	LILRB5	O75023	590 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	ADH5	P11766	374 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	PCBP4	P57723	403 aa	Known RBP	10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	TPBG	Q13641	420 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	DSG2	Q14126	1118 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	ANKRD54	Q6NXT1	300 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	ADGRD2	Q7Z7M1	963 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	RASGRP3	Q8IV61	690 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	LINC01555	Q8NAE3	123 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	OR4M1	Q8NGD0	313 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	GNPDA2	Q8TDQ7	276 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	CCDC120	Q96HB5	630 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	OR7D2	Q96RA2	312 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	SLC7A7	Q9UM01	511 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	NCKAP1	Q9Y2A7	1128 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	EXOSC1	Q9Y3B2	195 aa	Known RBP	10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	SIRT4	Q9Y6E7	314 aa	Predicted RBP	10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	ANAPC1	Q9H1A4	1944 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	TRPM6	Q9BX84	2022 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	ICMT	O60725	284 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	CLU	P10909	449 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	CSNK1G2	P78368	415 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	ADAM15	Q13444	863 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	GPR176	Q14439	515 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	ZC3H14	Q6PJT7	736 aa	Known RBP	10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	CXXC5	Q7LFL8	322 aa	Known RBP	10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	CEACAM19	Q7Z692	300 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	TMEM99	Q8N816	258 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	GRHL3	Q8TE85	626 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	ZNF431	Q8TF32	576 aa	Predicted RBP	10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	HMGB4	Q8WW32	186 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	SUSD6	Q92537	303 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	RFK	Q969G6	155 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	COQ10A	Q96MF6	247 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	THAP7	Q9BT49	309 aa	Predicted RBP	10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	ENKD1	Q9H0I2	346 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	STMN3	Q9NZ72	180 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	MGAT4A	Q9UM21	535 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	SF3B6	Q9Y3B4	125 aa	Known RBP	10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	BMP7	P18075	431 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	CSNK2A2	P19784	350 aa	Predicted RBP	10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	GSTM3	P21266	225 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	OR3A3	P47888	321 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	RRAS2	P62070	204 aa	Predicted RBP	10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	SIM1	P81133	766 aa	Predicted RBP	10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	FGFBP1	Q14512	234 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	AGER	Q15109	404 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	MINDY4	Q4G0A6	757 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	MTSS1L	Q765P7	747 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	SPRED2	Q7Z698	418 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	SIRT6	Q8N6T7	355 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	KCT2	Q8NC54	265 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	RIPOR3	Q96MK2	946 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	RNF32	Q9H0A6	362 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	PPP1R3E	Q9H7J1	279 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	ACOXL	Q9NUZ1	547 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	DEC1	Q9P2X7	70 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	CHST2	Q9Y4C5	530 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	HELZ	P42694	1942 aa	Known RBP	10.44	□□□□□ -0.74
VPS72-205	ENST00000491094		E9PI62	339 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	PSMD9	O00233	223 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	CDC42EP2	O14613	210 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	TBXA2R	P21731	343 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	PYCR1	P32322	319 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	MLLT3	P42568	568 aa	Predicted RBP	10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	MAPK9	P45984	424 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	AGFG1	P52594	562 aa	Known RBP	10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	PDX1	P52945	283 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	ABAT	P80404	500 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	NTRK2	Q16620	822 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	NDUFA9	Q16795	377 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	PRSS45	Q7RTY3	260 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	GCDH	Q92947	438 aa	Predicted RBP	10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	INSM2	Q96T92	566 aa	Predicted RBP	10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	IFT27	Q9BW83	186 aa		10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	SPRTN	Q9H040	489 aa	Predicted RBP	10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	MRPS30	Q9NP92	439 aa	Known RBP	10.44	□□□□□ -0.74
VPS72-205	ENST00000491094	HEATR5B	Q9P2D3	2071 aa		10.43	□□□□□ -0.74
VPS72-205	ENST00000491094	ASCC3	Q8N3C0	2202 aa	Known RBP	10.43	□□□□□ -0.74
VPS72-205	ENST00000491094	ARRDC5	A6NEK1	342 aa		10.43	□□□□□ -0.74
VPS72-205	ENST00000491094	CRYZL1	O95825	349 aa		10.43	□□□□□ -0.74
VPS72-205	ENST00000491094	AIFM1	O95831	613 aa		10.43	□□□□□ -0.74
VPS72-205	ENST00000491094	PRG2	P13727	222 aa		10.43	□□□□□ -0.74
VPS72-205	ENST00000491094	ENDOU	P21128	410 aa	Known RBP	10.43	□□□□□ -0.74
VPS72-205	ENST00000491094	CCR6	P51684	374 aa		10.43	□□□□□ -0.74
VPS72-205	ENST00000491094	BNC1	Q01954	994 aa		10.43	□□□□□ -0.74
VPS72-205	ENST00000491094	PCDH1	Q08174	1060 aa		10.43	□□□□□ -0.74
VPS72-205	ENST00000491094	FUT5	Q11128	374 aa		10.43	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms