RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 TAS2R10Q9NYW0 307 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 TAS2R9Q9NYW1 312 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 BAIAP2L1Q9UHR4 511 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 ZDHHC2Q9UIJ5 367 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 WBP11Q9Y2W2 641 aaKnown RBP10.68□□□□□ -0.7
SRSF4-204ENST00000489898 SHISA8B8ZZ34 492 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 NPIPB9F8W1W9 429 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 SCAMP2O15127 329 aaKnown RBP10.67□□□□□ -0.7
SRSF4-204ENST00000489898 OIP5O43482 229 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 IL18BPO95998 194 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 NEFHP12036 1026 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 CHMP24386 653 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 LOXP28300 417 aaPredicted RBP10.67□□□□□ -0.7
SRSF4-204ENST00000489898 MPIP34949 423 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 CCT5P48643 541 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 CLDN20P56880 219 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 PSPHP78330 225 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 RPP38P78345 283 aaKnown RBP10.67□□□□□ -0.7
SRSF4-204ENST00000489898 MRPS22P82650 360 aaKnown RBP10.67□□□□□ -0.7
SRSF4-204ENST00000489898 PRR5P85299 388 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 HSPB3Q12988 150 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 CD226Q15762 336 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 DUSP5Q16690 384 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 CYP27C1Q4G0S4 372 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 FLYWCH1Q4VC44 716 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 GALNT10Q86SR1 603 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 GCNT2Q8N0V5 402 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 SLC16A11Q8NCK7 471 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 FBXO30Q8TB52 745 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 FAM120BQ96EK7 910 aaKnown RBP10.67□□□□□ -0.7
SRSF4-204ENST00000489898 C1GALT1C1Q96EU7 318 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 OTUB1Q96FW1 271 aaPredicted RBP10.67□□□□□ -0.7
SRSF4-204ENST00000489898 MARK4Q96L34 752 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 BBS4Q96RK4 519 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 TRIB1Q96RU8 372 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 SORT1Q99523 831 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 REEP4Q9H6H4 257 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 RUBCNLQ9H714 662 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 MIEF1Q9NQG6 463 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 PFDN4Q9NQP4 134 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 RASSF1Q9NS23 344 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 DDX18Q9NVP1 670 aaKnown RBP10.67□□□□□ -0.7
SRSF4-204ENST00000489898 ALKBH4Q9NXW9 302 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.67□□□□□ -0.7
SRSF4-204ENST00000489898 ATP6V1HQ9UI12 483 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 FIS1Q9Y3D6 152 aa10.67□□□□□ -0.7
SRSF4-204ENST00000489898 V9GYY5 206 aaPredicted RBP10.67□□□□□ -0.7
SRSF4-204ENST00000489898 A0A1W2PNV4 684 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 OR2M5A3KFT3 312 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 CCDC151A5D8V7 595 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 A6NNC1 897 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 ITM2AO43736 263 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 LYPLA1O75608 230 aaPredicted RBP10.66□□□□□ -0.7
SRSF4-204ENST00000489898 RCBTB2O95199 551 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 UTS2O95399 124 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 OXSR1O95747 527 aaPredicted RBP10.66□□□□□ -0.7
SRSF4-204ENST00000489898 CGAP01215 116 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 C1QCP02747 245 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 BPGMP07738 259 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 NGFRP08138 427 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 CTSSP25774 331 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 DPP4P27487 766 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 IL12BP29460 328 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 NTSP30990 170 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 C21orf58P58505 322 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 SORDQ00796 357 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 MLC1Q15049 377 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 IMPG1Q17R60 797 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.66□□□□□ -0.71e-11■■■■■ 73.9
SRSF4-204ENST00000489898 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.66□□□□□ -0.7
SRSF4-204ENST00000489898 VWA1Q6PCB0 445 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 C22orf34Q6ZV56 151 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 EXOC3L1Q86VI1 746 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 OR7A2PQ8NGA2 310 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 OR5M1Q8NGP8 315 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 OR4C3Q8NH37 302 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 OR14L1PQ8NHC6 308 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 POC1BQ8TC44 478 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 FIG4Q92562 907 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 TMCO6Q96DC7 493 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 C16orf58Q96GQ5 468 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 PKNOX2Q96KN3 472 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 MS4A4EQ96PG1 132 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 ZNF559Q9BR84 538 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 DSN1Q9H410 356 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 CXorf36Q9H7Y0 433 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 ACSS1Q9NUB1 689 aaPredicted RBP10.66□□□□□ -0.7
SRSF4-204ENST00000489898 GIMAP4Q9NUV9 329 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 GPATCH2Q9NW75 528 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 GALNT8Q9NY28 637 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 MED11Q9P086 117 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 HAO1Q9UJM8 370 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 RPH3AQ9Y2J0 694 aaPredicted RBP10.66□□□□□ -0.7
SRSF4-204ENST00000489898 TRAF6Q9Y4K3 522 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 ROS1P08922 2347 aa10.66□□□□□ -0.7
SRSF4-204ENST00000489898 DSCAMO60469 2012 aa10.65□□□□□ -0.7
SRSF4-204ENST00000489898 CENPVL1A0A0U1RR11 272 aa10.65□□□□□ -0.7
SRSF4-204ENST00000489898 ALG1L2C9J202 215 aa10.65□□□□□ -0.7
SRSF4-204ENST00000489898 FAM47E-STBD1D6RA91 191 aa10.65□□□□□ -0.7
SRSF4-204ENST00000489898 SLC28A1O00337 649 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms