RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 RAET1LQ5VY80 246 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 APOOLQ6UXV4 268 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 RNF165Q6ZSG1 346 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 CHMP1BQ7LBR1 199 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 SZRD1Q7Z422 152 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 GALNT10Q86SR1 603 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 LUZP2Q86TE4 346 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 KIF18BQ86Y91 864 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 GRAMD2AQ8IUY3 354 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 UBQLNLQ8IYU4 475 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 GCNT2Q8N0V5 402 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 RIBC1Q8N443 379 aaPredicted RBP10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 NUP43Q8NFH3 380 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 ZFP28Q8NHY6 868 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 LINC01560Q8TB33 94 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 TWIST2Q8WVJ9 160 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 SLC9A6Q92581 669 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 ZBED6CLQ96FA7 236 aaPredicted RBP10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 RMND5BQ96G75 393 aaPredicted RBP10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 UCN2Q96RP3 112 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 CLEC4MQ9H2X3 399 aaPredicted RBP10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 LIME1Q9H400 295 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 C3orf14Q9HBI5 128 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 EML4Q9HC35 981 aaKnown RBP10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 RASSF1Q9NS23 344 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 FAM120CQ9NX05 1096 aaKnown RBP10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 JKAMPQ9P055 326 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 CLCF1Q9UBD9 225 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 FOXD3Q9UJU5 478 aaPredicted RBP10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 ABCG2Q9UNQ0 655 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 ZNF337Q9Y3M9 751 aa10.8□□□□□ -0.68
CCHCR1-215ENST00000488920 MED12Q93074 2177 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 A6NNC1 897 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 H0YC42 278 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 TBX19O60806 448 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 PEX11AO75192 247 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 KCNH1O95259 989 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 SLU7O95391 586 aaKnown RBP10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 IFI6P09912 130 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 ARRB2P32121 409 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 ART1P52961 327 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 PSMD4P55036 377 aaKnown RBP10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 TPD52P55327 224 aaPredicted RBP10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 PDE7AQ13946 482 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 GRAMD1BQ3KR37 738 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 P4HA3Q7Z4N8 544 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 OR7A2PQ8NGA2 310 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 OR4C3Q8NH37 302 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 CEP70Q8NHQ1 597 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 FBXO30Q8TB52 745 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 AENQ8WTP8 325 aaKnown RBP10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 OTUB1Q96FW1 271 aaPredicted RBP10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 C16orf58Q96GQ5 468 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 ZNF764Q96H86 408 aaPredicted RBP10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 C3orf30Q96M34 536 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 YIPF4Q9BSR8 244 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 SFXN3Q9BWM7 321 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 RBM24Q9BX46 236 aaKnown RBP10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 TBL1XR1Q9BZK7 514 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 ROPN1BQ9BZX4 212 aaPredicted RBP10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 PTGES2Q9H7Z7 377 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 ROPN1Q9HAT0 212 aaPredicted RBP10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 ACSS1Q9NUB1 689 aaPredicted RBP10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 TMED5Q9Y3A6 229 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 V9GYY5 206 aaPredicted RBP10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 EXPH5Q8NEV8 1989 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 KIAA1549Q9HCM3 1950 aa10.79□□□□□ -0.68
CCHCR1-215ENST00000488920 SPG11Q96JI7 2443 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 FAM221AA4D161 298 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 TTC36A6NLP5 189 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 EMC8O43402 210 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 NKX2-2O95096 273 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 ANGPTL1O95841 491 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 ACP2P11117 423 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 EPXP11678 715 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 PEPDP12955 493 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 MAP3K8P41279 467 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 FRKP42685 505 aaPredicted RBP10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 ASMTP46597 345 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 CPA2P48052 419 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 SUCLG1P53597 346 aaKnown RBP10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 IST1P53990 364 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 CLDN15P56746 228 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 C17orf67Q0P5P2 114 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 DAZAP2Q15038 168 aaPredicted RBP10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 VPS26BQ4G0F5 336 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 FIGNL1Q6PIW4 674 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 SPNS3Q6ZMD2 512 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 R3HCC1LQ7Z5L2 792 aaKnown RBP10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 CDC20BQ86Y33 519 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 MEIOBQ8N635 442 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 CDRT4Q8N9R6 151 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 SLC16A11Q8NCK7 471 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 GOT1L1Q8NHS2 421 aaPredicted RBP10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 NUDT8Q8WV74 236 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 HOXB13Q92826 284 aaPredicted RBP10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 C1GALT1C1Q96EU7 318 aa10.78□□□□□ -0.68
CCHCR1-215ENST00000488920 GIMAP5Q96F15 307 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms