RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 POU6F2P78424 691 aaPredicted RBP17.04■□□□□ 0.32
PTCD3-217ENST00000488801 SRSF1Q07955 248 aaKnown RBP eCLIP17.04■□□□□ 0.32
PTCD3-217ENST00000488801 AP1ARQ63HQ0 302 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 TIGD3Q6B0B8 471 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 HEPHL1Q6MZM0 1159 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 Q6ZPB1 254 aaPredicted RBP17.04■□□□□ 0.32
PTCD3-217ENST00000488801 CHDHQ8NE62 594 aaPredicted RBP17.04■□□□□ 0.32
PTCD3-217ENST00000488801 OR5D16Q8NGK9 328 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 C10orf82Q8WW14 230 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 JADE3Q92613 823 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 GTF2H4Q92759 462 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 PANX1Q96RD7 426 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 SLC35A5Q9BS91 424 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 RTN4RQ9BZR6 473 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 FBXO34Q9NWN3 711 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 KLHL14Q9P2G3 628 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 FAF1Q9UNN5 650 aaPredicted RBP17.04■□□□□ 0.32
PTCD3-217ENST00000488801 C15orf41Q9Y2V0 281 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 LIPGQ9Y5X9 500 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 ICE1Q9Y2F5 2266 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 MED12LQ86YW9 2145 aa17.03■□□□□ 0.32
PTCD3-217ENST00000488801 A0A1B0GVC2 190 aa17.03■□□□□ 0.32
PTCD3-217ENST00000488801 CCDC154A6NI56 674 aa17.03■□□□□ 0.32
PTCD3-217ENST00000488801 NPIPB9F8W1W9 429 aa17.03■□□□□ 0.32
PTCD3-217ENST00000488801 STSP08842 583 aa17.03■□□□□ 0.32
PTCD3-217ENST00000488801 CELA3AP09093 270 aa17.03■□□□□ 0.32
PTCD3-217ENST00000488801 ELAVL4P26378 380 aaKnown RBP17.03■□□□□ 0.32
PTCD3-217ENST00000488801 PLGLB1Q02325 96 aa17.03■□□□□ 0.32
PTCD3-217ENST00000488801 FUT5Q11128 374 aa17.03■□□□□ 0.32
PTCD3-217ENST00000488801 GRAMD1BQ3KR37 738 aa17.03■□□□□ 0.32
PTCD3-217ENST00000488801 LRIF1Q5T3J3 769 aa17.03■□□□□ 0.32
PTCD3-217ENST00000488801 GFRALQ6UXV0 394 aa17.03■□□□□ 0.32
PTCD3-217ENST00000488801 PACS2Q86VP3 889 aa17.03■□□□□ 0.32
PTCD3-217ENST00000488801 GHDCQ8N2G8 530 aa17.03■□□□□ 0.32
PTCD3-217ENST00000488801 WDSUB1Q8N9V3 476 aa17.03■□□□□ 0.32
PTCD3-217ENST00000488801 ADAMTS15Q8TE58 950 aa17.03■□□□□ 0.32
PTCD3-217ENST00000488801 ZFP90Q8TF47 636 aa17.03■□□□□ 0.32
PTCD3-217ENST00000488801 KLRF1Q9NZS2 232 aa17.03■□□□□ 0.32
PTCD3-217ENST00000488801 CCDC167Q9P0B6 97 aa17.03■□□□□ 0.32
PTCD3-217ENST00000488801 TRIM33Q9UPN9 1127 aa17.03■□□□□ 0.32
PTCD3-217ENST00000488801 USP9YO00507 2555 aaPredicted RBP17.03■□□□□ 0.32
PTCD3-217ENST00000488801 INTS1Q8N201 2190 aaKnown RBP17.02■□□□□ 0.32
PTCD3-217ENST00000488801 RFXANKO14593 260 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 UTS2O95399 124 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 HPNP05981 417 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 GUSBP08236 651 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 MATN1P21941 496 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 MAGEA8P43361 318 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 TRPC1P48995 793 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 TXNL4AP83876 142 aaKnown RBP17.02■□□□□ 0.32
PTCD3-217ENST00000488801 HSF1Q00613 529 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 DCST2Q5T1A1 773 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 CCNJQ5T5M9 372 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 FIGNL1Q6PIW4 674 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 ANGPTL8Q6UXH0 198 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 APOOLQ6UXV4 268 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 TRIML2Q8N7C3 387 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 FADS6Q8N9I5 356 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 SPDL1Q96EA4 605 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 ITCHQ96J02 903 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 G6PC3Q9BUM1 346 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 PAIP1Q9H074 479 aaKnown RBP17.02■□□□□ 0.32
PTCD3-217ENST00000488801 OR51I1Q9H343 314 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 RABEP2Q9H5N1 569 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 RMND5AQ9H871 391 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 ACKR4Q9NPB9 350 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 FAM53CQ9NYF3 392 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 GMEB1Q9Y692 573 aa17.02■□□□□ 0.32
PTCD3-217ENST00000488801 IGLV3-32A0A0A0MS00 114 aa17.01■□□□□ 0.31
PTCD3-217ENST00000488801 TRBV5-3A0A0A0MS03 114 aa17.01■□□□□ 0.31
PTCD3-217ENST00000488801 DUXAA6NLW8 204 aa17.01■□□□□ 0.31
PTCD3-217ENST00000488801 C17orf51A8MQB3 221 aa17.01■□□□□ 0.31
PTCD3-217ENST00000488801 ALG1L2C9J202 215 aa17.01■□□□□ 0.31
PTCD3-217ENST00000488801 ZIC2O95409 532 aaPredicted RBP17.01■□□□□ 0.31
PTCD3-217ENST00000488801 OXSR1O95747 527 aaPredicted RBP17.01■□□□□ 0.31
PTCD3-217ENST00000488801 AK1P00568 194 aa17.01■□□□□ 0.31
PTCD3-217ENST00000488801 GSNP06396 782 aa17.01■□□□□ 0.31
PTCD3-217ENST00000488801 ENDOUP21128 410 aaKnown RBP17.01■□□□□ 0.31
PTCD3-217ENST00000488801 TBXA2RP21731 343 aa17.01■□□□□ 0.31
PTCD3-217ENST00000488801 ARFIP2P53365 341 aa17.01■□□□□ 0.31
PTCD3-217ENST00000488801 GTDC1Q4AE62 458 aa17.01■□□□□ 0.31
PTCD3-217ENST00000488801 SLC2A7Q6PXP3 512 aa17.01■□□□□ 0.31
PTCD3-217ENST00000488801 DNAJC14Q6Y2X3 702 aaPredicted RBP17.01■□□□□ 0.31
PTCD3-217ENST00000488801 TRILQ7L0X0 811 aa17.01■□□□□ 0.31
PTCD3-217ENST00000488801 GALNT10Q86SR1 603 aa17.01■□□□□ 0.31
PTCD3-217ENST00000488801 MSRB3Q8IXL7 192 aa17.01■□□□□ 0.31
PTCD3-217ENST00000488801 TSPEARQ8WU66 669 aa17.01■□□□□ 0.31
PTCD3-217ENST00000488801 CHMP6Q96FZ7 201 aa17.01■□□□□ 0.31
PTCD3-217ENST00000488801 ZNF350Q9GZX5 532 aa17.01■□□□□ 0.31
PTCD3-217ENST00000488801 B4GALT7Q9UBV7 327 aa17.01■□□□□ 0.31
PTCD3-217ENST00000488801 PCDHGB3Q9Y5G1 929 aa17.01■□□□□ 0.31
PTCD3-217ENST00000488801 A0A096LPI6 279 aa17■□□□□ 0.31
PTCD3-217ENST00000488801 A0A1W2PQD3 144 aa17■□□□□ 0.31
PTCD3-217ENST00000488801 PRAMEF27A3QJZ7 478 aa17■□□□□ 0.31
PTCD3-217ENST00000488801 HMGN4O00479 90 aa17■□□□□ 0.31
PTCD3-217ENST00000488801 NR5A2O00482 541 aa17■□□□□ 0.31
PTCD3-217ENST00000488801 SUSD5O60279 629 aa17■□□□□ 0.31
PTCD3-217ENST00000488801 MASP1P48740 699 aa17■□□□□ 0.31
PTCD3-217ENST00000488801 KHKP50053 298 aa17■□□□□ 0.31
PTCD3-217ENST00000488801 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms