RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 HTR1EP28566 365 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 KRT20P35900 424 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 ADH7P40394 386 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 PRKAG1P54619 331 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 GFRA1P56159 465 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 HBA1P69905 142 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 PMPCAQ10713 525 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 ZNHIT3Q15649 155 aaPredicted RBP12.92□□□□□ -0.34
COL9A2-208ENST00000488463 WIPI1Q5MNZ9 446 aaPredicted RBP12.92□□□□□ -0.34
COL9A2-208ENST00000488463 TMEM211Q6ICI0 200 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 ZNF585AQ6P3V2 769 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 ZCCHC12Q6PEW1 402 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 OTOGQ6ZRI0 2925 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 YRDCQ86U90 279 aaKnown RBP12.92□□□□□ -0.34
COL9A2-208ENST00000488463 ULK2Q8IYT8 1036 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 EID3Q8N140 333 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 NATD1Q8N6N6 113 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 FBXO30Q8TB52 745 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 MAELQ96JY0 434 aaKnown RBP12.92□□□□□ -0.34
COL9A2-208ENST00000488463 ATP6V1G3Q96LB4 118 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 TEX37Q96LM6 180 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 DUSP26Q9BV47 211 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 UGT2B28Q9BY64 529 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 C3orf14Q9HBI5 128 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 ATAD3AQ9NVI7 634 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 FAM120CQ9NX05 1096 aaKnown RBP12.92□□□□□ -0.34
COL9A2-208ENST00000488463 NKIRAS1Q9NYS0 192 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 RNF6Q9Y252 685 aa12.92□□□□□ -0.34
COL9A2-208ENST00000488463 MRPS18CQ9Y3D5 142 aaKnown RBP12.92□□□□□ -0.34
COL9A2-208ENST00000488463 CREBBPQ92793 2442 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 IGLV3-32A0A0A0MS00 114 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 FIGNL2A6NMB9 653 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 PRSS44E7EML9 344 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 ZIC3O60481 467 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 KCNK2O95069 426 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 DDX5P17844 614 aaKnown RBP12.91□□□□□ -0.34
COL9A2-208ENST00000488463 EPHA3P29320 983 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 CCT3P49368 545 aaKnown RBP12.91□□□□□ -0.34
COL9A2-208ENST00000488463 B3GALT5-AS1P59052 145 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 TFF3Q07654 80 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 GRAMD1BQ3KR37 738 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 VPS26BQ4G0F5 336 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 C1orf185Q5T7R7 199 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 WLSQ5T9L3 541 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 ATG16L1Q676U5 607 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 SP5Q6BEB4 398 aaPredicted RBP12.91□□□□□ -0.34
COL9A2-208ENST00000488463 OR5M10Q6IEU7 315 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 OR4F3Q6IEY1 312 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 CLECL1Q8IZS7 167 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 SFXN5Q8TD22 340 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 GPR151Q8TDV0 419 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 SLC9A6Q92581 669 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 ZNF75CPQ92670 426 aaPredicted RBP12.91□□□□□ -0.34
COL9A2-208ENST00000488463 TESCQ96BS2 214 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 SDCCAG3Q96C92 435 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 OTUB1Q96FW1 271 aaPredicted RBP12.91□□□□□ -0.34
COL9A2-208ENST00000488463 RMND5BQ96G75 393 aaPredicted RBP12.91□□□□□ -0.34
COL9A2-208ENST00000488463 WDYHV1Q96HA8 205 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 PRPF18Q99633 342 aaKnown RBP12.91□□□□□ -0.34
COL9A2-208ENST00000488463 YIPF4Q9BSR8 244 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 SERHL2Q9H4I8 314 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 WDR55Q9H6Y2 383 aaPredicted RBP12.91□□□□□ -0.34
COL9A2-208ENST00000488463 ZCCHC3Q9NUD5 404 aaKnown RBP12.91□□□□□ -0.34
COL9A2-208ENST00000488463 AIG1Q9NVV5 245 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 GIN1Q9NXP7 522 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 MARCOQ9UEW3 520 aaPredicted RBP12.91□□□□□ -0.34
COL9A2-208ENST00000488463 SPG11Q96JI7 2443 aa12.91□□□□□ -0.34
COL9A2-208ENST00000488463 C15orf38-AP3S2A0A0A6YYH1 394 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 TOXO94900 526 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 KCNH1O95259 989 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 UTS2O95399 124 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 NGFRP08138 427 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 HOXD4P09016 255 aaPredicted RBP12.9□□□□□ -0.34
COL9A2-208ENST00000488463 IL12AP29459 219 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 SRD5A2P31213 254 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 PRR5P85299 388 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 LASP1Q14847 261 aaKnown RBP12.9□□□□□ -0.34
COL9A2-208ENST00000488463 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.9□□□□□ -0.34
COL9A2-208ENST00000488463 LSM12Q3MHD2 195 aaKnown RBP12.9□□□□□ -0.34
COL9A2-208ENST00000488463 ACSF3Q4G176 576 aaPredicted RBP12.9□□□□□ -0.34
COL9A2-208ENST00000488463 SLC9B1Q4ZJI4 515 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 CDC73Q6P1J9 531 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 B3GNT6Q6ZMB0 384 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 ACAD11Q709F0 780 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 GALNT10Q86SR1 603 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 MARCH3Q86UD3 253 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 MED12LQ86YW9 2145 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 CCDC71Q8IV32 467 aaPredicted RBP12.9□□□□□ -0.34
COL9A2-208ENST00000488463 OR2M3Q8NG83 312 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 OR56A1Q8NGH5 318 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 OR4C3Q8NH37 302 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 LILRB4Q8NHJ6 448 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 STACQ99469 402 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 TREX2Q9BQ50 279 aaPredicted RBP12.9□□□□□ -0.34
COL9A2-208ENST00000488463 G6PC3Q9BUM1 346 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 PIGUQ9H490 435 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 EXO5Q9H790 373 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 NEUROD4Q9HD90 331 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 DUSP22Q9NRW4 184 aa12.9□□□□□ -0.34
COL9A2-208ENST00000488463 GPR45Q9Y5Y3 372 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms