RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 EMC2Q15006 297 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 UPP1Q16831 310 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 SHROOM1Q2M3G4 852 aaPredicted RBP3.97□□□□□ -1.77
SRRM1-215ENST00000488317 ZNF528Q3MIS6 628 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 LRRC31Q6UY01 552 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 LRRTM1Q86UE6 522 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 SLC35F6Q8N357 371 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 ARL6IP6Q8N6S5 226 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 BCORP1Q8N888 145 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 AQP11Q8NBQ7 271 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 CHDHQ8NE62 594 aaPredicted RBP3.97□□□□□ -1.77
SRRM1-215ENST00000488317 WDR36Q8NI36 951 aaKnown RBP3.97□□□□□ -1.77
SRRM1-215ENST00000488317 GIPC3Q8TF64 312 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 CHPT1Q8WUD6 406 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 NSMCE3Q96MG7 304 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 MYCBPQ99417 103 aaPredicted RBP3.97□□□□□ -1.77
SRRM1-215ENST00000488317 LGMNQ99538 433 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 CRACR2AQ9BSW2 395 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 FICDQ9BVA6 458 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 TSGA10Q9BZW7 698 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 STRADBQ9C0K7 418 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 LY9Q9HBG7 655 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 LZTFL1Q9NQ48 299 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 ZNHIT6Q9NWK9 470 aaKnown RBP3.97□□□□□ -1.77
SRRM1-215ENST00000488317 RMND1Q9NWS8 449 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 GDAP2Q9NXN4 497 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 NDE1Q9NXR1 346 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 BARHL2Q9NY43 387 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 ATXN10Q9UBB4 475 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 TUBGCP4Q9UGJ1 667 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 LCMT1Q9UIC8 334 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 ZNF490Q9ULM2 529 aaPredicted RBP3.97□□□□□ -1.77
SRRM1-215ENST00000488317 HPCAL4Q9UM19 191 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 CHMP2BQ9UQN3 213 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 KLHDC2Q9Y2U9 406 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 LOXHD1Q8IVV2 1947 aa3.97□□□□□ -1.77
SRRM1-215ENST00000488317 FOCADQ5VW36 1801 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 A0A087WYN8 130 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 IGLON5A6NGN9 336 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 ZNF724A8MTY0 619 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 EI24O14681 340 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 POLR2DO15514 142 aaKnown RBP3.96□□□□□ -1.78
SRRM1-215ENST00000488317 BUB1O43683 1085 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 ZFAND5O76080 213 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 PCCAP05165 728 aaPredicted RBP3.96□□□□□ -1.78
SRRM1-215ENST00000488317 CA3P07451 260 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 UQCRFS1P1P0C7P4 283 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 EPB41P11171 864 aaKnown RBP3.96□□□□□ -1.78
SRRM1-215ENST00000488317 IL4RP24394 825 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 CALML3P27482 149 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 CYLC1P35663 651 aaPredicted RBP3.96□□□□□ -1.78
SRRM1-215ENST00000488317 PPP1R2P41236 205 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 SLC1A6P48664 564 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 HAND2P61296 217 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 HERVK_113P63132 956 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 ERVK-8P63133 956 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 SRYQ05066 204 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 RAPSNQ13702 412 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 FASTKQ14296 549 aaKnown RBP3.96□□□□□ -1.78
SRRM1-215ENST00000488317 HAGHQ16775 308 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 MS4A18Q3C1V0 323 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 KRTAP24-1Q3LI83 254 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 EMBQ6PCB8 327 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 GDPGP1Q6ZNW5 385 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 ERASQ7Z444 233 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 P4HA3Q7Z4N8 544 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 GPR142Q7Z601 462 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 ZFAND4Q86XD8 727 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 CENPSQ8N2Z9 138 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 MMGT1Q8N4V1 131 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 BANPQ8N9N5 519 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 OR1K1Q8NGR3 316 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 PNPLA2Q96AD5 504 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 RCHY1Q96PM5 261 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 RAB11FIP5Q9BXF6 653 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 ERVK-6Q9BXR3 956 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 KRTAP17-1Q9BYP8 105 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 RNF41Q9H4P4 317 aaPredicted RBP3.96□□□□□ -1.78
SRRM1-215ENST00000488317 NT5DC2Q9H857 520 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 TXLNGQ9NUQ3 528 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 TAS2R16Q9NYV7 291 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 NUDT4Q9NZJ9 180 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 TMOD2Q9NZR1 351 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 RWDD2AQ9UIY3 292 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 GGA2Q9UJY4 613 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 IKZF3Q9UKT9 509 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 ROBO1Q9Y6N7 1651 aa3.96□□□□□ -1.78
SRRM1-215ENST00000488317 SLX4Q8IY92 1834 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 ZNF831Q5JPB2 1677 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 IGHV3-38A0A0C4DH36 116 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 A0A0J9YVX5 310 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 ERICH2A1L162 156 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 LRRIQ3A6PVS8 624 aaPredicted RBP3.95□□□□□ -1.78
SRRM1-215ENST00000488317 PDHXO00330 501 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 PDXKO00764 312 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 EIF3HO15372 352 aaKnown RBP eCLIP3.95□□□□□ -1.78
SRRM1-215ENST00000488317 N4BP1O75113 896 aaKnown RBP3.95□□□□□ -1.78
SRRM1-215ENST00000488317 ERLIN2O94905 339 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 RHOXF2BP0C7M4 288 aa3.95□□□□□ -1.78
SRRM1-215ENST00000488317 CALM1P0DP23 149 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms