RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 AHCTF1Q8WYP5 2266 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 LOC105369274A0A096LPK9 316 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 LOC102723532A0A0G2JNH3 316 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 A0A1W2PRG6 482 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 PSMD4P55036 377 aaKnown RBP12.41□□□□□ -0.42
HMGN1-216ENST00000486741 DSG2Q14126 1118 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 TRMT12Q53H54 448 aaKnown RBP12.41□□□□□ -0.42
HMGN1-216ENST00000486741 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.41□□□□□ -0.42
HMGN1-216ENST00000486741 OR4N4Q8N0Y3 316 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 LINC01555Q8NAE3 123 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 MFSD9Q8NBP5 474 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 EFHD2Q96C19 240 aaPredicted RBP12.41□□□□□ -0.42
HMGN1-216ENST00000486741 TRIM2Q9C040 744 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 RNF167Q9H6Y7 350 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 A0A0J9YY10 115 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 HMGN4O00479 90 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 DNAJB5O75953 348 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 HLA-DPB1P04440 258 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 PSKH1P11801 424 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 PDX1P52945 283 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 ZNF91Q05481 1191 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 ZXDCQ2QGD7 858 aaPredicted RBP12.41□□□□□ -0.42
HMGN1-216ENST00000486741 OR4F15Q8NGB8 312 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 OR8K3Q8NH51 312 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 NEIL3Q8TAT5 605 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 TRUB1Q8WWH5 349 aaKnown RBP12.41□□□□□ -0.42
HMGN1-216ENST00000486741 RSC1A1Q92681 617 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 MUL1Q969V5 352 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 ELSPBP1Q96BH3 223 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 C1QTNF2Q9BXJ5 285 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 GREB1Q4ZG55 1949 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 HYAL1Q12794 435 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 NSDHLQ15738 373 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 CALHM3Q86XJ0 350 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 SCAIQ8N9R8 606 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 OR52E2Q8NGJ4 325 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 ELP4Q96EB1 424 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 PRRC1Q96M27 445 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 TMEM38AQ9H6F2 299 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.41□□□□□ -0.42
HMGN1-216ENST00000486741 OBP2AQ9NY56 170 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 SERTAD3Q9UJW9 196 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 SPATA2Q9UM82 520 aa12.41□□□□□ -0.42
HMGN1-216ENST00000486741 TRAV27A0A087WT01 109 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 IQCMA0A1B0GVH7 501 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 DBIP07108 87 aaKnown RBP12.4□□□□□ -0.42
HMGN1-216ENST00000486741 EDNRAP25101 427 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 ELAVL4P26378 380 aaKnown RBP12.4□□□□□ -0.42
HMGN1-216ENST00000486741 LIPAP38571 399 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 XCR1P46094 333 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 KCNJ5P48544 419 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 RGS6P49758 472 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 DCST2Q5T1A1 773 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 C8orf82Q6P1X6 216 aaPredicted RBP12.4□□□□□ -0.42
HMGN1-216ENST00000486741 C11orf88Q6PI97 169 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 CDRT4Q8N9R6 151 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 TSEN15Q8WW01 171 aaKnown RBP12.4□□□□□ -0.42
HMGN1-216ENST00000486741 TM9SF2Q99805 663 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 PINK1Q9BXM7 581 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 FBRSQ9HAH7 460 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 ZNF222Q9UK12 451 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 A0A075B6Q4 140 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 TRAPPC13A5PLN9 417 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 CTDSP2O14595 271 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 SOX2P48431 317 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 SLC48A1Q6P1K1 146 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 Q6ZS52 159 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 TBC1D15Q8TC07 691 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 SLC6A18Q96N87 628 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 NELL2Q99435 816 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 CDADC1Q9BWV3 514 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 MED20Q9H944 212 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 TRPV5Q9NQA5 729 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 CLEC2DQ9UHP7 191 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 PPP1R3DO95685 299 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 GPR75O95800 540 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 MASP1P48740 699 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 MRPS21P82921 87 aaKnown RBP12.4□□□□□ -0.42
HMGN1-216ENST00000486741 TMEM64Q6YI46 380 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 ZNF527Q8NB42 609 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 THEM6Q8WUY1 208 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 PIGKQ92643 395 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 ZDHHC12Q96GR4 267 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 MAP3K3Q99759 626 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 HCN2Q9UL51 889 aa12.4□□□□□ -0.42
HMGN1-216ENST00000486741 SIP14410 1827 aa12.4□□□□□ -0.43
HMGN1-216ENST00000486741 C12orf71A8MTZ7 269 aa12.4□□□□□ -0.43
HMGN1-216ENST00000486741 CDC40O60508 579 aaKnown RBP eCLIP12.4□□□□□ -0.43
HMGN1-216ENST00000486741 ADORA3P0DMS8 318 aa12.4□□□□□ -0.43
HMGN1-216ENST00000486741 SLC2A2P11168 524 aaPredicted RBP12.4□□□□□ -0.43
HMGN1-216ENST00000486741 CXCR4P61073 352 aa12.4□□□□□ -0.43
HMGN1-216ENST00000486741 DLX2Q07687 328 aaPredicted RBP12.4□□□□□ -0.43
HMGN1-216ENST00000486741 ADPRMQ3LIE5 342 aa12.4□□□□□ -0.43
HMGN1-216ENST00000486741 MRPL2Q5T653 305 aaKnown RBP12.4□□□□□ -0.43
HMGN1-216ENST00000486741 SLC29A4Q7RTT9 530 aa12.4□□□□□ -0.43
HMGN1-216ENST00000486741 ANKRD13BQ86YJ7 626 aa12.4□□□□□ -0.43
HMGN1-216ENST00000486741 ADAD1Q96M93 576 aaKnown RBP12.4□□□□□ -0.43
HMGN1-216ENST00000486741 C19orf43Q9BQ61 176 aa12.4□□□□□ -0.43
HMGN1-216ENST00000486741 WACQ9BTA9 647 aa12.4□□□□□ -0.43
HMGN1-216ENST00000486741 CENPOQ9BU64 300 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms