RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 RNF14Q9UBS8 474 aa12.76□□□□□ -0.37
SDCCAG3-211ENST00000486441 MCM8Q9UJA3 840 aa12.76□□□□□ -0.37
SDCCAG3-211ENST00000486441 LAMP3Q9UQV4 416 aa12.76□□□□□ -0.37
SDCCAG3-211ENST00000486441 MYO1GB0I1T2 1018 aa12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 SS18L1O75177 396 aaPredicted RBP12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 PPP3CBP16298 524 aa12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 PSMA4P25789 261 aaKnown RBP12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 IL12BP29460 328 aa12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 HSD17B3P37058 310 aa12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 PSPHP78330 225 aa12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 STX5Q13190 355 aa12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 MFSD12Q6NUT3 480 aa12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 SEZ6L2Q6UXD5 910 aa12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 ATG4DQ86TL0 474 aaPredicted RBP12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 CCDC25Q86WR0 208 aa12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 OR6K3Q8NGY3 331 aa12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 C16orf78Q8WTQ4 265 aa12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 NEUROG1Q92886 237 aa12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 EXOSC8Q96B26 276 aaKnown RBP12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 MTBPQ96DY7 904 aa12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 FAIM2Q9BWQ8 316 aa12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 VPS11Q9H270 941 aa12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 CXorf56Q9H5V9 222 aa12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 SLC35C2Q9NQQ7 365 aa12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 XPR1Q9UBH6 696 aa12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 AP4B1Q9Y6B7 739 aa12.75□□□□□ -0.37
SDCCAG3-211ENST00000486441 MANBAO00462 879 aa12.74□□□□□ -0.37
SDCCAG3-211ENST00000486441 NDUFS7O75251 213 aa12.74□□□□□ -0.37
SDCCAG3-211ENST00000486441 OR4F21O95013 312 aa12.74□□□□□ -0.37
SDCCAG3-211ENST00000486441 IGKV1D-16P01601 117 aa12.74□□□□□ -0.37
SDCCAG3-211ENST00000486441 RBP1P09455 135 aa12.74□□□□□ -0.37
SDCCAG3-211ENST00000486441 ARL1P40616 181 aaPredicted RBP12.74□□□□□ -0.37
SDCCAG3-211ENST00000486441 PAFAH1B1P43034 410 aa12.74□□□□□ -0.37
SDCCAG3-211ENST00000486441 DMTNQ08495 405 aa12.74□□□□□ -0.37
SDCCAG3-211ENST00000486441 GANABQ14697 944 aaKnown RBP12.74□□□□□ -0.37
SDCCAG3-211ENST00000486441 CYP27C1Q4G0S4 372 aa12.74□□□□□ -0.37
SDCCAG3-211ENST00000486441 KLC3Q6P597 504 aa12.74□□□□□ -0.37
SDCCAG3-211ENST00000486441 WFDC8Q8IUA0 241 aa12.74□□□□□ -0.37
SDCCAG3-211ENST00000486441 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.74□□□□□ -0.37
SDCCAG3-211ENST00000486441 APIPQ96GX9 242 aa12.74□□□□□ -0.37
SDCCAG3-211ENST00000486441 GMPPAQ96IJ6 420 aaPredicted RBP12.74□□□□□ -0.37
SDCCAG3-211ENST00000486441 ACTR6Q9GZN1 396 aa12.74□□□□□ -0.37
SDCCAG3-211ENST00000486441 FAM120CQ9NX05 1096 aaKnown RBP12.74□□□□□ -0.37
SDCCAG3-211ENST00000486441 ABCG2Q9UNQ0 655 aa12.74□□□□□ -0.37
SDCCAG3-211ENST00000486441 C19orf53Q9UNZ5 99 aaPredicted RBP12.74□□□□□ -0.37
SDCCAG3-211ENST00000486441 YLPM1P49750 1951 aaKnown RBP12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 A0A096LNT2 108 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 A8MT66 165 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 UPK1AO00322 258 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 ADAMDEC1O15204 470 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 CD5LO43866 347 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 GCM2O75603 506 aaPredicted RBP12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 IL33O95760 270 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 CD8AP01732 235 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 IGHV4-39P01824 125 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 PSMB1P20618 241 aaKnown RBP12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 KRT20P35900 424 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 ACVR1BP36896 505 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 MAP3K8P41279 467 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 HTR6P50406 440 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 SERPINB8P50452 374 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 PGGHGQ32M88 737 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 UNC50Q53HI1 259 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 GALNT18Q6P9A2 607 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 OR10D3Q8NH80 312 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 DTNBP1Q96EV8 351 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 ACPTQ9BZG2 426 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 OR10A4Q9H209 315 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 SLCO5A1Q9H2Y9 848 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 ZDHHC18Q9NUE0 388 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 TAS2R9Q9NYW1 312 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 DMGDHQ9UI17 866 aaKnown RBP12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 SNX6Q9UNH7 406 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 GPR52Q9Y2T5 361 aa12.73□□□□□ -0.37
SDCCAG3-211ENST00000486441 A0A087WV62 115 aa12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 A0A0J9YW62 118 aa12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 GXYLT2A0PJZ3 443 aa12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 TLX2O43763 284 aaPredicted RBP12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 NTN1O95631 604 aa12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 OTCP00480 354 aa12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 OPN1LWP04000 364 aa12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 HSD3B1P14060 373 aa12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 HSD3B2P26439 372 aa12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 CDKN1AP38936 164 aa12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 EIF1AXP47813 144 aaKnown RBP12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 RPS3AP61247 264 aaKnown RBP12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 RPS4XP62701 263 aaKnown RBP12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 MRPS22P82650 360 aaKnown RBP12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 PRR5P85299 388 aa12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 CAV1Q03135 178 aa12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 C2orf54Q08AI8 447 aa12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 VEZF1Q14119 521 aa12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 TSC22D1Q15714 1073 aa12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 ERCC6LQ2NKX8 1250 aa12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 NCMAPQ5T1S8 102 aa12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 LGSNQ5TDP6 509 aa12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 PODNL1Q6PEZ8 512 aa12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 DNAJC14Q6Y2X3 702 aaPredicted RBP12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 GALNT10Q86SR1 603 aa12.72□□□□□ -0.37
SDCCAG3-211ENST00000486441 GABRG1Q8N1C3 465 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms