RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 STX3Q13277 289 aa11.72□□□□□ -0.53
CHMP3-208ENST00000486404 TP53BP2Q13625 1128 aa11.72□□□□□ -0.53
CHMP3-208ENST00000486404 GANABQ14697 944 aaKnown RBP11.72□□□□□ -0.53
CHMP3-208ENST00000486404 LSM12Q3MHD2 195 aaKnown RBP11.72□□□□□ -0.53
CHMP3-208ENST00000486404 RAET1LQ5VY80 246 aa11.72□□□□□ -0.53
CHMP3-208ENST00000486404 MFSD12Q6NUT3 480 aa11.72□□□□□ -0.53
CHMP3-208ENST00000486404 KRTCAP2Q8N6L1 136 aa11.72□□□□□ -0.53
CHMP3-208ENST00000486404 NATD1Q8N6N6 113 aa11.72□□□□□ -0.53
CHMP3-208ENST00000486404 OR56A1Q8NGH5 318 aa11.72□□□□□ -0.53
CHMP3-208ENST00000486404 MGARPQ8TDB4 240 aa11.72□□□□□ -0.53
CHMP3-208ENST00000486404 LRRC46Q96FV0 321 aa11.72□□□□□ -0.53
CHMP3-208ENST00000486404 SPOCK3Q9BQ16 436 aa11.72□□□□□ -0.53
CHMP3-208ENST00000486404 TRIM8Q9BZR9 551 aa11.72□□□□□ -0.53
CHMP3-208ENST00000486404 OCEL1Q9H607 264 aa11.72□□□□□ -0.53
CHMP3-208ENST00000486404 PTGES2Q9H7Z7 377 aa11.72□□□□□ -0.53
CHMP3-208ENST00000486404 NEUROD4Q9HD90 331 aa11.72□□□□□ -0.53
CHMP3-208ENST00000486404 NKIRAS1Q9NYS0 192 aa11.72□□□□□ -0.53
CHMP3-208ENST00000486404 RPH3AQ9Y2J0 694 aaPredicted RBP11.72□□□□□ -0.53
CHMP3-208ENST00000486404 TMEM120BA0PK00 339 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 TOXO94900 526 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 NKX2-2O95096 273 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 KRT16P08779 473 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 DHRS4L1P0CG22 281 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 ACP2P11117 423 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 LAMP1P11279 417 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 G6PDP11413 515 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 HPGDP15428 266 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 BMP5P22003 454 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 RPL14P50914 215 aaKnown RBP11.71□□□□□ -0.53
CHMP3-208ENST00000486404 GAS1P54826 345 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 DSCR4P56555 118 aaPredicted RBP11.71□□□□□ -0.53
CHMP3-208ENST00000486404 WNT3P56703 355 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 EMX2Q04743 252 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 MLC1Q15049 377 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 PGS1Q32NB8 556 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 CES4AQ5XG92 561 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 GALNT10Q86SR1 603 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 RNF138Q8WVD3 245 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 NTNG2Q96CW9 530 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 FAM120BQ96EK7 910 aaKnown RBP11.71□□□□□ -0.53
CHMP3-208ENST00000486404 OTUB1Q96FW1 271 aaPredicted RBP11.71□□□□□ -0.53
CHMP3-208ENST00000486404 WDYHV1Q96HA8 205 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 YIPF4Q9BSR8 244 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 DUSP26Q9BV47 211 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 BHLHE41Q9C0J9 482 aaPredicted RBP11.71□□□□□ -0.53
CHMP3-208ENST00000486404 DSN1Q9H410 356 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 ZNF395Q9H8N7 513 aaPredicted RBP11.71□□□□□ -0.53
CHMP3-208ENST00000486404 HHATLQ9HCP6 504 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 FLRT3Q9NZU0 649 aa11.71□□□□□ -0.53
CHMP3-208ENST00000486404 FAF1Q9UNN5 650 aaPredicted RBP11.71□□□□□ -0.53
CHMP3-208ENST00000486404 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.71□□□□□ -0.53
CHMP3-208ENST00000486404 NUP214P35658 2090 aaPredicted RBP11.71□□□□□ -0.54
CHMP3-208ENST00000486404 MYO9AB2RTY4 2548 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 C17orf51A8MQB3 221 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 FADS1O60427 444 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 C6orf47O95873 294 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 EPPINO95925 133 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 HK1P19367 917 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 POU3F2P20265 443 aaPredicted RBP11.7□□□□□ -0.54
CHMP3-208ENST00000486404 ATP6V1C1P21283 382 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 DGKQP52824 942 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 POU6F2P78424 691 aaPredicted RBP11.7□□□□□ -0.54
CHMP3-208ENST00000486404 TFF3Q07654 80 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 MYBPHQ13203 477 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 LASP1Q14847 261 aaKnown RBP11.7□□□□□ -0.54
CHMP3-208ENST00000486404 DUSP5Q16690 384 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 SMU1Q2TAY7 513 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 GRAMD1BQ3KR37 738 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 TNFAIP8L3Q5GJ75 292 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 NSUN5P2Q63ZY6 315 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 ZCCHC12Q6PEW1 402 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 BHLHB9Q6PI77 547 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 FIGNL1Q6PIW4 674 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 CHMP1BQ7LBR1 199 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 MARCH3Q86UD3 253 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 TRIM42Q8IWZ5 723 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 SLC16A11Q8NCK7 471 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 TNIP2Q8NFZ5 429 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 OR2M3Q8NG83 312 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 SFXN5Q8TD22 340 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 OR5P2Q8WZ92 322 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 MOAP1Q96BY2 351 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 GIMAP5Q96F15 307 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 SORT1Q99523 831 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 G6PC3Q9BUM1 346 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 NUF2Q9BZD4 464 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 ENKD1Q9H0I2 346 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 SLC24A3Q9HC58 644 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 NPDC1Q9NQX5 325 aaPredicted RBP11.7□□□□□ -0.54
CHMP3-208ENST00000486404 ASIC5Q9NY37 505 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 NTMQ9P121 344 aa11.7□□□□□ -0.54
CHMP3-208ENST00000486404 APCP25054 2843 aa11.69□□□□□ -0.54
CHMP3-208ENST00000486404 LRBAP50851 2863 aa11.69□□□□□ -0.54
CHMP3-208ENST00000486404 CD8B2A6NJW9 211 aa11.69□□□□□ -0.54
CHMP3-208ENST00000486404 EEF1E1-BLOC1S5C9J1V9 151 aa11.69□□□□□ -0.54
CHMP3-208ENST00000486404 SCDO00767 359 aa11.69□□□□□ -0.54
CHMP3-208ENST00000486404 EEF1E1O43324 174 aaKnown RBP11.69□□□□□ -0.54
CHMP3-208ENST00000486404 GMFGO60234 142 aa11.69□□□□□ -0.54
CHMP3-208ENST00000486404 ANGPTL1O95841 491 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms