RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 FBF1Q8TES7 1133 aa7.25□□□□□ -1.25
XRN1-212ENST00000486211 ZNF669Q96BR6 464 aaPredicted RBP7.25□□□□□ -1.25
XRN1-212ENST00000486211 TMCO6Q96DC7 493 aa7.25□□□□□ -1.25
XRN1-212ENST00000486211 MTBPQ96DY7 904 aa7.25□□□□□ -1.25
XRN1-212ENST00000486211 WDR34Q96EX3 536 aa7.25□□□□□ -1.25
XRN1-212ENST00000486211 SLC35A4Q96G79 324 aa7.25□□□□□ -1.25
XRN1-212ENST00000486211 COL21A1Q96P44 957 aa7.25□□□□□ -1.25
XRN1-212ENST00000486211 JMJD8Q96S16 334 aa7.25□□□□□ -1.25
XRN1-212ENST00000486211 PRRG4Q9BZD6 226 aa7.25□□□□□ -1.25
XRN1-212ENST00000486211 DDX47Q9H0S4 455 aaKnown RBP7.25□□□□□ -1.25
XRN1-212ENST00000486211 DSN1Q9H410 356 aa7.25□□□□□ -1.25
XRN1-212ENST00000486211 UNKLQ9H9P5 680 aaKnown RBP7.25□□□□□ -1.25
XRN1-212ENST00000486211 MYOZ1Q9NP98 299 aaPredicted RBP7.25□□□□□ -1.25
XRN1-212ENST00000486211 ABHD10Q9NUJ1 306 aa7.25□□□□□ -1.25
XRN1-212ENST00000486211 PHF11Q9UIL8 331 aa7.25□□□□□ -1.25
XRN1-212ENST00000486211 USP22Q9UPT9 525 aa7.25□□□□□ -1.25
XRN1-212ENST00000486211 RNF114Q9Y508 228 aa7.25□□□□□ -1.25
XRN1-212ENST00000486211 FKBP7Q9Y680 259 aa7.25□□□□□ -1.25
XRN1-212ENST00000486211 AP4B1Q9Y6B7 739 aa7.25□□□□□ -1.25
XRN1-212ENST00000486211 PCNX3Q9H6A9 2034 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 KRTAP4-8A0A0G2JLE6 195 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 ZNF814B7Z6K7 855 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 WNT11O96014 354 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 GIFP27352 417 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 TLX1P31314 330 aaPredicted RBP7.24□□□□□ -1.25
XRN1-212ENST00000486211 MAGEA1P43355 309 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 CHN2P52757 468 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 CDKL1Q00532 357 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 CHRNB3Q05901 458 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 MGAT2Q10469 447 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 STK11Q15831 433 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 OR4C11Q6IEV9 310 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 PPP4R4Q6NUP7 873 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 FDX2Q6P4F2 183 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 SLC22A25Q6T423 547 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 GALNT10Q86SR1 603 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 TDRPQ86YL5 185 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 ZCCHC7Q8N3Z6 543 aaKnown RBP7.24□□□□□ -1.25
XRN1-212ENST00000486211 ZNF540Q8NDQ6 660 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 OR52B6Q8NGF0 335 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 TMBIM1Q969X1 311 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 ZNF717Q9BY31 904 aaPredicted RBP7.24□□□□□ -1.25
XRN1-212ENST00000486211 KCNF1Q9H3M0 494 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.24□□□□□ -1.25
XRN1-212ENST00000486211 GPRC5BQ9NZH0 403 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 POU2F3Q9UKI9 436 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 MGAT4BQ9UQ53 548 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 ASB4Q9Y574 426 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 PMF1-BGLAPU3KQ54 211 aa7.24□□□□□ -1.25
XRN1-212ENST00000486211 SDR42E2A6NKP2 422 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 PLPP1O14494 284 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 EIF1AYO14602 144 aaKnown RBP7.23□□□□□ -1.25
XRN1-212ENST00000486211 PGRMC2O15173 223 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 CXCL13O43927 109 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 TMPRSS11DO60235 418 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 TSPAN2O60636 221 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 LYZL6O75951 148 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 PGM3O95394 542 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 STAMBPO95630 424 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 PTMAP06454 111 aaKnown RBP7.23□□□□□ -1.25
XRN1-212ENST00000486211 DHRS4L1P0CG22 281 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 NR2F6P10588 404 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 EPORP19235 508 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 DRD5P21918 477 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 CD40P25942 277 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 HNMTP50135 292 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 BASP1P80723 227 aaKnown RBP7.23□□□□□ -1.25
XRN1-212ENST00000486211 GANABQ14697 944 aaKnown RBP7.23□□□□□ -1.25
XRN1-212ENST00000486211 MORF4L2Q15014 288 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 EXOSC7Q15024 291 aaKnown RBP7.23□□□□□ -1.25
XRN1-212ENST00000486211 TIMM23BQ5SRD1 257 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 KHDRBS2Q5VWX1 349 aaKnown RBP7.23□□□□□ -1.25
XRN1-212ENST00000486211 LMNTD2Q8IXW0 634 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 RNF10Q8N5U6 811 aaKnown RBP7.23□□□□□ -1.25
XRN1-212ENST00000486211 ANKS4BQ8N8V4 417 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 LRRC57Q8N9N7 239 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 C2CD4AQ8NCU7 369 aaPredicted RBP7.23□□□□□ -1.25
XRN1-212ENST00000486211 C1orf54Q8WWF1 131 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 C1GALT1C1Q96EU7 318 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 PTCD3Q96EY7 689 aaKnown RBP7.23□□□□□ -1.25
XRN1-212ENST00000486211 PDLIM5Q96HC4 596 aaKnown RBP7.23□□□□□ -1.25
XRN1-212ENST00000486211 SERPINB12Q96P63 405 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 SNX18Q96RF0 628 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 ADOQ96SZ5 270 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 INPP5KQ9BT40 448 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 LRRC1Q9BTT6 524 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 TRMOQ9BU70 441 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 RTN4RQ9BZR6 473 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 TSGA10Q9BZW7 698 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 SLITRK2Q9H156 845 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 OR51B5Q9H339 312 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 MED11Q9P086 117 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 ZNF639Q9UID6 485 aa7.23□□□□□ -1.25
XRN1-212ENST00000486211 MCTS1Q9ULC4 181 aaKnown RBP7.23□□□□□ -1.25
XRN1-212ENST00000486211 A0A0A6YYD5 115 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 NPIPA5A0A0B4J1W7 369 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 MEGF11A6BM72 1044 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 NPEPPSL1A6NEC2 478 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 NPIPA7E9PJI5 369 aa7.22□□□□□ -1.25
XRN1-212ENST00000486211 ADAMDEC1O15204 470 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms