RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 LHX3Q9UBR4 397 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 TUBGCP4Q9UGJ1 667 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 ODF2LQ9ULJ1 636 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 PIN4Q9Y237 131 aaKnown RBP2.14□□□□□ -2.07
GCFC2-209ENST00000486016 ZNF175Q9Y473 711 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 GAKO14976 1311 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 AFF2P51816 1311 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 LRCOL1A6NCL2 159 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 PRPSAP2O60256 369 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 TGFAP01135 160 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 IL10P22301 178 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 MAPK3P27361 379 aaPredicted RBP2.13□□□□□ -2.07
GCFC2-209ENST00000486016 TMOD1P28289 359 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 HSPA1LP34931 641 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 SLC6A8P48029 635 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 ZNF85Q03923 595 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 ZKSCAN8Q15776 578 aaPredicted RBP2.13□□□□□ -2.07
GCFC2-209ENST00000486016 MPPED2Q15777 294 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 KCTD19Q17RG1 926 aaPredicted RBP2.13□□□□□ -2.07
GCFC2-209ENST00000486016 AGKQ53H12 422 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 TOR1AIP1Q5JTV8 583 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 FAM159AQ6UWV7 190 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 CWC27Q6UX04 472 aaKnown RBP2.13□□□□□ -2.07
GCFC2-209ENST00000486016 TMEM26Q6ZUK4 368 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 Q7L0L9 218 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 MOB1BQ7L9L4 216 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 ZNF589Q86UQ0 364 aaPredicted RBP2.13□□□□□ -2.07
GCFC2-209ENST00000486016 AMZ2Q86W34 360 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 KDM8Q8N371 416 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 MLKLQ8NB16 471 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 ZNF397Q8NF99 534 aaPredicted RBP2.13□□□□□ -2.07
GCFC2-209ENST00000486016 FBXO30Q8TB52 745 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 ADAMTS16Q8TE57 1224 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 UBE2Q2Q8WVN8 375 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 SAMD8Q96LT4 415 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 FAM111AQ96PZ2 611 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 GPR174Q9BXC1 333 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 C1orf21Q9H246 121 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 HSD3B7Q9H2F3 369 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 FAM124BQ9H5Z6 455 aaPredicted RBP2.13□□□□□ -2.07
GCFC2-209ENST00000486016 NRN1Q9NPD7 142 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 STARD5Q9NSY2 213 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 CNOT2Q9NZN8 540 aaKnown RBP2.13□□□□□ -2.07
GCFC2-209ENST00000486016 MIOXQ9UGB7 285 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 IL20RAQ9UHF4 553 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 PLA2G4CQ9UP65 541 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 UBE4BO95155 1302 aa2.13□□□□□ -2.07
GCFC2-209ENST00000486016 A0A1W2PQ67 120 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 CYB561D2O14569 222 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 SNAI2O43623 268 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 SSX5O60225 188 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 CYP11B1P15538 503 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 CCNA2P20248 432 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 MAGEA4P43358 317 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 NUMBP49757 651 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 SGSHP51688 502 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 VCPP55072 806 aaKnown RBP2.12□□□□□ -2.07
GCFC2-209ENST00000486016 SLC26A5P58743 744 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 BPIFB3P59826 476 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 MYBPC1Q00872 1141 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 FUT7Q11130 342 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 NME3Q13232 169 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 KARSQ15046 597 aaKnown RBP2.12□□□□□ -2.07
GCFC2-209ENST00000486016 ZIC1Q15915 447 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 ZSWIM7Q19AV6 140 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 SHROOM1Q2M3G4 852 aaPredicted RBP2.12□□□□□ -2.07
GCFC2-209ENST00000486016 ZNF699Q32M78 642 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 DCAF4L1Q3SXM0 396 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 CCDC92Q53HC0 331 aaPredicted RBP2.12□□□□□ -2.07
GCFC2-209ENST00000486016 IL23RQ5VWK5 629 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 OLFM4Q6UX06 510 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 ISLR2Q6UXK2 745 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 DPY19L2P2Q6ZN68 376 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 LUZP1Q86V48 1076 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 ZSCAN30Q86W11 494 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 PYROXD2Q8N2H3 581 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 RNF148Q8N7C7 305 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 CNNM3Q8NE01 707 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 FNDC8Q8TC99 324 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 DQX1Q8TE96 717 aaKnown RBP2.12□□□□□ -2.07
GCFC2-209ENST00000486016 MRPL38Q96DV4 380 aaKnown RBP2.12□□□□□ -2.07
GCFC2-209ENST00000486016 CCDC51Q96ER9 411 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 CPXM1Q96SM3 734 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 NDUFAF3Q9BU61 184 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 HCAR1Q9BXC0 346 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 KRT23Q9C075 422 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 CCSER1Q9C0I3 900 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 NACA2Q9H009 215 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 ATG10Q9H0Y0 220 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 CENPMQ9NSP4 180 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 SOHLH2Q9NX45 425 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 HOOK1Q9UJC3 728 aaKnown RBP2.12□□□□□ -2.07
GCFC2-209ENST00000486016 SLC9A8Q9Y2E8 581 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 SYNJ2O15056 1496 aa2.12□□□□□ -2.07
GCFC2-209ENST00000486016 RASGRF2O14827 1237 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 CFLARO15519 480 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 BUB1O43683 1085 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 DFNA5O60443 496 aa2.11□□□□□ -2.07
GCFC2-209ENST00000486016 RANBP6O60518 1105 aaKnown RBP2.11□□□□□ -2.07
GCFC2-209ENST00000486016 STK17BO94768 372 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms