RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 WISP1O95388 367 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 CBX6O95503 412 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 KRT75O95678 551 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 CELA3AP09093 270 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 NPIPA8P0DM63 369 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 GDF1P27539 372 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 TRPC1P48995 793 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 SNTA1Q13424 505 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.83□□□□□ -0.68
HPS4-214ENST00000485842 CMPK2Q5EBM0 449 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 PAGE3Q5JUK9 113 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 TMEM81Q6P7N7 255 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 OLIG3Q7RTU3 272 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 C16orf62Q7Z3J2 963 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 SPATA21Q7Z572 469 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 CPLX4Q7Z7G2 160 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 ZGRF1Q86YA3 2104 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 GHDCQ8N2G8 530 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 FAM109AQ8N4B1 249 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 OR1J4Q8NGS1 313 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 MIPOL1Q8TD10 442 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 ZFP90Q8TF47 636 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 XAGE5Q8WWM1 108 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 TMEM41AQ96HV5 264 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 G6PC3Q9BUM1 346 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 TBL1XR1Q9BZK7 514 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 PAIP1Q9H074 479 aaKnown RBP10.83□□□□□ -0.68
HPS4-214ENST00000485842 ZNF703Q9H7S9 590 aaPredicted RBP10.83□□□□□ -0.68
HPS4-214ENST00000485842 EXD2Q9NVH0 621 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 TMEM45AQ9NWC5 275 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 ABCG2Q9UNQ0 655 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 HRH3Q9Y5N1 445 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 LIPGQ9Y5X9 500 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 A0A096LPI6 279 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 A0A1W2PP18 115 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 GMNCA6NCL1 334 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 DUXAA6NLW8 204 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 SNPHO15079 494 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 FADS1O60427 444 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 SOX30O94993 753 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 OXSR1O95747 527 aaPredicted RBP10.82□□□□□ -0.68
HPS4-214ENST00000485842 ZCCHC18P0CG32 403 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 DRD4P21917 467 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 ELAVL4P26378 380 aaKnown RBP10.82□□□□□ -0.68
HPS4-214ENST00000485842 PTPN6P29350 595 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 CLK3P49761 638 aaKnown RBP10.82□□□□□ -0.68
HPS4-214ENST00000485842 RNF144AP50876 292 aaPredicted RBP10.82□□□□□ -0.68
HPS4-214ENST00000485842 ANXA11P50995 505 aaKnown RBP10.82□□□□□ -0.68
HPS4-214ENST00000485842 HPCAP84074 193 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 RBPJQ06330 500 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 TOMM20Q15388 145 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 EIF2S3LQ2VIR3 472 aaKnown RBP10.82□□□□□ -0.68
HPS4-214ENST00000485842 KRTCAP3Q53RY4 240 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 COX20Q5RI15 118 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.82□□□□□ -0.68
HPS4-214ENST00000485842 ATAD3BQ5T9A4 648 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 FNDC7Q5VTL7 733 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 OR5M10Q6IEU7 315 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 MARCH3Q86UD3 253 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 ZNF614Q8N883 585 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 GATSQ8NAP1 163 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 PRR7Q8TB68 274 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 FAM110BQ8TC76 370 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 GNRHR2Q96P88 292 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 LDAHQ9H6V9 325 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 EXO5Q9H790 373 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 ZDHHC11Q9H8X9 412 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 TPT1P8Q9HAU6 139 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 SLC52A3Q9NQ40 469 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 SAR1AQ9NR31 198 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 PPP4R1LQ9P1A2 415 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 LEF1Q9UJU2 399 aaPredicted RBP10.82□□□□□ -0.68
HPS4-214ENST00000485842 OSGIN2Q9Y236 505 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 C15orf41Q9Y2V0 281 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 PCDHB14Q9Y5E9 798 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 CAPN7Q9Y6W3 813 aa10.82□□□□□ -0.68
HPS4-214ENST00000485842 RP1L1Q8IWN7 2480 aaPredicted RBP10.82□□□□□ -0.68
HPS4-214ENST00000485842 ESPL1Q14674 2120 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 SPENQ96T58 3664 aaKnown RBP10.81□□□□□ -0.68
HPS4-214ENST00000485842 A0A1B0GTH9 108 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 HMGN4O00479 90 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 SCDO00767 359 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 TRAPPC6AO75865 159 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 ANGPTL1O95841 491 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 AGR2O95994 175 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 AK1P00568 194 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 SNRPB2P08579 225 aaKnown RBP10.81□□□□□ -0.68
HPS4-214ENST00000485842 HPGDP15428 266 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 ABOP16442 354 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 LCN1P31025 176 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 CRATP43155 626 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 GAS1P54826 345 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 FUT5Q11128 374 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 KLF10Q13118 480 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 SLC10A1Q14973 349 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 GPR68Q15743 365 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 HYAL4Q2M3T9 481 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 FLYWCH1Q4VC44 716 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 GPAT3Q53EU6 434 aa10.81□□□□□ -0.68
HPS4-214ENST00000485842 TIGD3Q6B0B8 471 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms