RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 OR4K17Q8NGC6 315 aa11.72□□□□□ -0.53
HDAC6-227ENST00000485102 DCAKDQ8WVC6 231 aa11.72□□□□□ -0.53
HDAC6-227ENST00000485102 C11orf24Q96F05 449 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-227ENST00000485102 PERPQ96FX8 193 aa11.72□□□□□ -0.53
HDAC6-227ENST00000485102 HS3ST6Q96QI5 342 aa11.72□□□□□ -0.53
HDAC6-227ENST00000485102 MRPL57Q9BQC6 102 aaKnown RBP11.72□□□□□ -0.53
HDAC6-227ENST00000485102 OPN3Q9H1Y3 402 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-227ENST00000485102 VPS11Q9H270 941 aa11.72□□□□□ -0.53
HDAC6-227ENST00000485102 DSN1Q9H410 356 aa11.72□□□□□ -0.53
HDAC6-227ENST00000485102 VIPAS39Q9H9C1 493 aa11.72□□□□□ -0.53
HDAC6-227ENST00000485102 UBTD1Q9HAC8 227 aa11.72□□□□□ -0.53
HDAC6-227ENST00000485102 FOLH1BQ9HBA9 442 aa11.72□□□□□ -0.53
HDAC6-227ENST00000485102 PLSCR4Q9NRQ2 329 aa11.72□□□□□ -0.53
HDAC6-227ENST00000485102 TAS2R9Q9NYW1 312 aa11.72□□□□□ -0.53
HDAC6-227ENST00000485102 XPR1Q9UBH6 696 aa11.72□□□□□ -0.53
HDAC6-227ENST00000485102 DCDC2Q9UHG0 476 aa11.72□□□□□ -0.53
HDAC6-227ENST00000485102 MID2Q9UJV3 735 aa11.72□□□□□ -0.53
HDAC6-227ENST00000485102 ABCG2Q9UNQ0 655 aa11.72□□□□□ -0.53
HDAC6-227ENST00000485102 ZNF337Q9Y3M9 751 aa11.72□□□□□ -0.53
HDAC6-227ENST00000485102 CHD3Q12873 2000 aaKnown RBP11.71□□□□□ -0.53
HDAC6-227ENST00000485102 A0A087WV62 115 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 INAFM1C9JVW0 142 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 PPP6CO00743 305 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 KLF4O43474 513 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 SLITRK5O94991 958 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 FCGR2AP12318 317 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 MPIP34949 423 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 GSTM5P46439 218 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 ALDH9A1P49189 494 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 SUCLG1P53597 346 aaKnown RBP11.71□□□□□ -0.53
HDAC6-227ENST00000485102 NAA20P61599 178 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 CSTF3Q12996 717 aaKnown RBP11.71□□□□□ -0.53
HDAC6-227ENST00000485102 HEPACAMQ14CZ8 416 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 TMEM44Q2T9K0 475 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 BEX5Q5H9J7 111 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 BEND6Q5SZJ8 279 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-227ENST00000485102 FAM180BQ6P0A1 224 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 FAM214BQ7L5A3 538 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 CXXC5Q7LFL8 322 aaKnown RBP11.71□□□□□ -0.53
HDAC6-227ENST00000485102 OR9A2Q8NGT5 310 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 PIGQQ9BRB3 760 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 MRPL46Q9H2W6 279 aaKnown RBP11.71□□□□□ -0.53
HDAC6-227ENST00000485102 PTGES2Q9H7Z7 377 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 ANKRA2Q9H9E1 313 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 SLC35C2Q9NQQ7 365 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 SIRT5Q9NXA8 310 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 PPP4R1LQ9P1A2 415 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 AP4B1Q9Y6B7 739 aa11.71□□□□□ -0.53
HDAC6-227ENST00000485102 FBN1P35555 2871 aaKnown RBP11.71□□□□□ -0.54
HDAC6-227ENST00000485102 ANK3Q12955 4377 aaKnown RBP11.7□□□□□ -0.54
HDAC6-227ENST00000485102 CADP27708 2225 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 IGLV3-32A0A0A0MS00 114 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 OR2M5A3KFT3 312 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 TRIM49D1C9J1S8 452 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 SMAD7O15105 426 aaKnown RBP11.7□□□□□ -0.54
HDAC6-227ENST00000485102 RGS16O15492 202 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-227ENST00000485102 SOX30O94993 753 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 KRT6AP02538 564 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 KRT6BP04259 564 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 IL3P08700 152 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 SBK3P0C264 359 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 HK1P19367 917 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 KCNJ5P48544 419 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 KRT6CP48668 564 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 NR1H2P55055 460 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 CDH13P55290 713 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 RPS3AP61247 264 aaKnown RBP11.7□□□□□ -0.54
HDAC6-227ENST00000485102 RAE1P78406 368 aaKnown RBP11.7□□□□□ -0.54
HDAC6-227ENST00000485102 ZNF550Q7Z398 422 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 SLC44A2Q8IWA5 706 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-227ENST00000485102 UBQLNLQ8IYU4 475 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 ZNF611Q8N823 705 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 OR7G2Q8NG99 324 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 OR4N2Q8NGD1 307 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 UHMK1Q8TAS1 419 aaKnown RBP11.7□□□□□ -0.54
HDAC6-227ENST00000485102 FNDC9Q8TBE3 224 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 KAT2AQ92830 837 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 GFM2Q969S9 779 aaKnown RBP11.7□□□□□ -0.54
HDAC6-227ENST00000485102 EFHD2Q96C19 240 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-227ENST00000485102 MRRFQ96E11 262 aaKnown RBP11.7□□□□□ -0.54
HDAC6-227ENST00000485102 TMEM204Q9BSN7 226 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 PINK1Q9BXM7 581 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 IQCGQ9H095 443 aaKnown RBP11.7□□□□□ -0.54
HDAC6-227ENST00000485102 OR10A4Q9H209 315 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 GIMAP4Q9NUV9 329 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 FAM120CQ9NX05 1096 aaKnown RBP11.7□□□□□ -0.54
HDAC6-227ENST00000485102 TAS2R7Q9NYW3 318 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 LGALS13Q9UHV8 139 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 ADAM21Q9UKJ8 722 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 PROCRQ9UNN8 238 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 ACTL7BQ9Y614 415 aa11.7□□□□□ -0.54
HDAC6-227ENST00000485102 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-227ENST00000485102 TLDC2A0PJX2 215 aa11.69□□□□□ -0.54
HDAC6-227ENST00000485102 SERTM1A2A2V5 107 aa11.69□□□□□ -0.54
HDAC6-227ENST00000485102 C17orf51A8MQB3 221 aa11.69□□□□□ -0.54
HDAC6-227ENST00000485102 A8MT66 165 aa11.69□□□□□ -0.54
HDAC6-227ENST00000485102 MYO1GB0I1T2 1018 aa11.69□□□□□ -0.54
HDAC6-227ENST00000485102 H0YC42 278 aa11.69□□□□□ -0.54
HDAC6-227ENST00000485102 MANBAO00462 879 aa11.69□□□□□ -0.54
HDAC6-227ENST00000485102 COQ9O75208 318 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms