RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 RUNX3Q13761 415 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 CDC73Q6P1J9 531 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 MZT2AQ6P582 158 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 NKAIN4Q8IVV8 208 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 GRPEL2Q8TAA5 225 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 PHOSPHO2Q8TCD6 241 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 SLC7A6Q92536 515 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 KLK6Q92876 244 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 GAL3ST3Q96A11 431 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 SLC35A4Q96G79 324 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 MS4A4EQ96PG1 132 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 C1QTNF2Q9BXJ5 285 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 MTHFD2LQ9H903 347 aaPredicted RBP18.4■□□□□ 0.54
LIMS2-215ENST00000484252 POLMQ9NP87 494 aaPredicted RBP18.4■□□□□ 0.54
LIMS2-215ENST00000484252 SPHK1Q9NYA1 384 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 SERGEFQ9UGK8 458 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 ZNF443Q9Y2A4 671 aaPredicted RBP18.4■□□□□ 0.54
LIMS2-215ENST00000484252 GPSM3Q9Y4H4 160 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 TBC1D3KA0A087X1G2 549 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 A0A1W2PP55 124 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 TBC1D3FA6NER0 549 aaPredicted RBP18.4■□□□□ 0.54
LIMS2-215ENST00000484252 MYL9P24844 172 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 HOXD11P31277 338 aaPredicted RBP18.4■□□□□ 0.54
LIMS2-215ENST00000484252 CD79BP40259 229 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 PDX1P52945 283 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 BTN3A2P78410 334 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 ZNF155Q12901 538 aaPredicted RBP18.4■□□□□ 0.54
LIMS2-215ENST00000484252 ENPP2Q13822 863 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 CDK10Q15131 360 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 QPRTQ15274 297 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 TJAP1Q5JTD0 557 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 TMEM240Q5SV17 173 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 TBC1D3GQ6DHY5 549 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 VITQ6UXI7 678 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 C11orf74Q86VG3 221 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 NRMQ8IXM6 262 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 OR2T33Q8NG76 320 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 ENKURQ8TC29 256 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 KAT2AQ92830 837 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 H2AFY2Q9P0M6 372 aaPredicted RBP18.4■□□□□ 0.54
LIMS2-215ENST00000484252 PLEKHM1Q9Y4G2 1056 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 COLEC10Q9Y6Z7 277 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 TRPM6Q9BX84 2022 aa18.4■□□□□ 0.54
LIMS2-215ENST00000484252 PLA2G10O15496 165 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 NDUFV2P19404 249 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 SOX18P35713 384 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 MLLT3P42568 568 aaPredicted RBP18.39■□□□□ 0.53
LIMS2-215ENST00000484252 BDH1Q02338 343 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 PUS10Q3MIT2 529 aaKnown RBP18.39■□□□□ 0.53
LIMS2-215ENST00000484252 C6orf132Q5T0Z8 1188 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 TRIQKQ629K1 86 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 MFSD12Q6NUT3 480 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 FRRS1Q6ZNA5 592 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 NUDT18Q6ZVK8 323 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 MARCH9Q86YJ5 346 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 ZFP41Q8N8Y5 198 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 C19orf18Q8NEA5 215 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 ATP6V1C2Q8NEY4 427 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 OR4F15Q8NGB8 312 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 ANGPTL6Q8NI99 470 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 ZC3HAV1LQ96H79 300 aaKnown RBP18.39■□□□□ 0.53
LIMS2-215ENST00000484252 ATF6BQ99941 703 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 ZNF649Q9BS31 505 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 PPP1R3EQ9H7J1 279 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 GDE1Q9NZC3 331 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 COMMD3Q9UBI1 195 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 ADAM30Q9UKF2 790 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 PCDHGB7Q9Y5F8 929 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 NUMA1Q14980 2115 aa18.39■□□□□ 0.53
LIMS2-215ENST00000484252 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.38■□□□□ 0.53
LIMS2-215ENST00000484252 ZIC2O95409 532 aaPredicted RBP18.38■□□□□ 0.53
LIMS2-215ENST00000484252 CH25HO95992 272 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 SLC2A2P11168 524 aaPredicted RBP18.38■□□□□ 0.53
LIMS2-215ENST00000484252 GPR4P46093 362 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 RPS15AP62244 130 aaKnown RBP18.38■□□□□ 0.53
LIMS2-215ENST00000484252 RGS1Q08116 209 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 RIN1Q13671 783 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 CKAP5Q14008 2032 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 LTB4RQ15722 352 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 EIPR1Q53HC9 387 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 MZT2BQ6NZ67 158 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 CNIH2Q6PI25 160 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 GID4Q8IVV7 300 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 LRRC25Q8N386 305 aaPredicted RBP18.38■□□□□ 0.53
LIMS2-215ENST00000484252 GANCQ8TET4 914 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 DNAJA4Q8WW22 397 aaPredicted RBP18.38■□□□□ 0.53
LIMS2-215ENST00000484252 C1QTNF7Q9BXJ2 289 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 OR6C2Q9NZP2 312 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 MOSPD1Q9UJG1 213 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 CBLCQ9ULV8 474 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 ISM1B1AKI9 464 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 FAM25AB3EWG3 89 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 FAM25CB3EWG5 89 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 FAM25GB3EWG6 89 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 GABRPO00591 440 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 LRRTM2O43300 516 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 FCMRO60667 390 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 LALBAP00709 142 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 FCARP24071 287 aa18.38■□□□□ 0.53
LIMS2-215ENST00000484252 HLA-DMAP28067 261 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms