RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 FADS6Q8N9I5 356 aa14.5□□□□□ -0.09
UPF3A-208ENST00000484246 WDSUB1Q8N9V3 476 aa14.5□□□□□ -0.09
UPF3A-208ENST00000484246 CHDHQ8NE62 594 aaPredicted RBP14.5□□□□□ -0.09
UPF3A-208ENST00000484246 OR1J4Q8NGS1 313 aa14.5□□□□□ -0.09
UPF3A-208ENST00000484246 RFWD2Q8NHY2 731 aa14.5□□□□□ -0.09
UPF3A-208ENST00000484246 FBXO30Q8TB52 745 aa14.5□□□□□ -0.09
UPF3A-208ENST00000484246 FAM57AQ8TBR7 257 aa14.5□□□□□ -0.09
UPF3A-208ENST00000484246 ADAMTS15Q8TE58 950 aa14.5□□□□□ -0.09
UPF3A-208ENST00000484246 OIT3Q8WWZ8 545 aa14.5□□□□□ -0.09
UPF3A-208ENST00000484246 JADE3Q92613 823 aa14.5□□□□□ -0.09
UPF3A-208ENST00000484246 CDS1Q92903 461 aa14.5□□□□□ -0.09
UPF3A-208ENST00000484246 SLC35G5Q96KT7 338 aa14.5□□□□□ -0.09
UPF3A-208ENST00000484246 OR7D2Q96RA2 312 aa14.5□□□□□ -0.09
UPF3A-208ENST00000484246 PANX1Q96RD7 426 aa14.5□□□□□ -0.09
UPF3A-208ENST00000484246 YIPF4Q9BSR8 244 aa14.5□□□□□ -0.09
UPF3A-208ENST00000484246 NPHS2Q9NP85 383 aa14.5□□□□□ -0.09
UPF3A-208ENST00000484246 ERRFI1Q9UJM3 462 aaPredicted RBP14.5□□□□□ -0.09
UPF3A-208ENST00000484246 HRH3Q9Y5N1 445 aa14.5□□□□□ -0.09
UPF3A-208ENST00000484246 LIPGQ9Y5X9 500 aa14.5□□□□□ -0.09
UPF3A-208ENST00000484246 TRGV5A0A0B4J1U4 118 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 A0A1B0GTH9 108 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 CCDC154A6NI56 674 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 NPIPB9F8W1W9 429 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 BCKDKO14874 412 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 CDC40O60508 579 aaKnown RBP eCLIP14.49□□□□□ -0.09
UPF3A-208ENST00000484246 SEMA7AO75326 666 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 AGR2O95994 175 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 TROVE2P10155 538 aaKnown RBP eCLIP14.49□□□□□ -0.09
UPF3A-208ENST00000484246 TBXA2RP21731 343 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 GDF1P27539 372 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 CASP6P55212 293 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 GUCY1A3Q02108 690 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 TIGD2Q4W5G0 525 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 NHSL2Q5HYW2 709 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 DCST2Q5T1A1 773 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 HEPHL1Q6MZM0 1159 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 BLOC1S3Q6QNY0 202 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 FUNDC1Q8IVP5 155 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 NEIL3Q8TAT5 605 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 JSRP1Q96MG2 331 aaPredicted RBP14.49□□□□□ -0.09
UPF3A-208ENST00000484246 GNRHR2Q96P88 292 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 SLC35A5Q9BS91 424 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 INPP5KQ9BT40 448 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 OR2B2Q9GZK3 357 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 DEFB127Q9H1M4 99 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 RABEP2Q9H5N1 569 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 RMND5AQ9H871 391 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 SDHAF3Q9NRP4 125 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 UBQLN4Q9NRR5 601 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 FGFR1OP2Q9NVK5 253 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 FLRT3Q9NZU0 649 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 DCTN4Q9UJW0 460 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 TRIM33Q9UPN9 1127 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 MRPS18CQ9Y3D5 142 aaKnown RBP14.49□□□□□ -0.09
UPF3A-208ENST00000484246 HECTD1Q9ULT8 2610 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 EXPH5Q8NEV8 1989 aa14.49□□□□□ -0.09
UPF3A-208ENST00000484246 A0A1W2PQD3 144 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 RFXANKO14593 260 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 PRRG2O14669 202 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 CBR3O75828 277 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 CPSF4O95639 269 aaKnown RBP14.48□□□□□ -0.09
UPF3A-208ENST00000484246 OXSR1O95747 527 aaPredicted RBP14.48□□□□□ -0.09
UPF3A-208ENST00000484246 LDLRP01130 860 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 ABOP16442 354 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 HOXB9P17482 250 aaPredicted RBP14.48□□□□□ -0.09
UPF3A-208ENST00000484246 ENDOUP21128 410 aaKnown RBP14.48□□□□□ -0.09
UPF3A-208ENST00000484246 MATN1P21941 496 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 CDKN2CP42773 168 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 TRPC1P48995 793 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 CLK3P49761 638 aaKnown RBP14.48□□□□□ -0.09
UPF3A-208ENST00000484246 KHKP50053 298 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 PER3P56645 1201 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 C3AR1Q16581 482 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 GRAMD1BQ3KR37 738 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 CGB2Q6NT52 195 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 MTFR2Q6P444 385 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 FIGNL1Q6PIW4 674 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 ZAR1Q86SH2 424 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 MISPQ8IVT2 679 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 OTUB1Q96FW1 271 aaPredicted RBP14.48□□□□□ -0.09
UPF3A-208ENST00000484246 ITCHQ96J02 903 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 ZNF317Q96PQ6 595 aaPredicted RBP14.48□□□□□ -0.09
UPF3A-208ENST00000484246 ZNF350Q9GZX5 532 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 SLC52A3Q9NQ40 469 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 MRGBPQ9NV56 204 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 GMEB1Q9Y692 573 aa14.48□□□□□ -0.09
UPF3A-208ENST00000484246 A0A0G2JND7 137 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 B4DXG7 233 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 GNB5O14775 395 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 AGFG2O95081 481 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 SRD5A2P31213 254 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 ANXA11P50995 505 aaKnown RBP14.47□□□□□ -0.09
UPF3A-208ENST00000484246 RPS26P62854 115 aaKnown RBP14.47□□□□□ -0.09
UPF3A-208ENST00000484246 GANABQ14697 944 aaKnown RBP14.47□□□□□ -0.09
UPF3A-208ENST00000484246 ARHGAP11BQ3KRB8 267 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 CCNJQ5T5M9 372 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 C1QL3Q5VWW1 255 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 APOOLQ6UXV4 268 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 EID3Q8N140 333 aa14.47□□□□□ -0.09
UPF3A-208ENST00000484246 CLEC4FQ8N1N0 589 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms