RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 GPC3P51654 580 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 AP3M2P53677 418 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 SLC26A5P58743 744 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 DSTNP60981 165 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 CCNA1P78396 465 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 ZFP36L1Q07352 338 aaKnown RBP1.76□□□□□ -2.13
ITGB1-213ENST00000484088 ASPHQ12797 758 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 DNAJC3Q13217 504 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 CUL1Q13616 776 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 RAPSNQ13702 412 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 EMC2Q15006 297 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 KARSQ15046 597 aaKnown RBP1.76□□□□□ -2.13
ITGB1-213ENST00000484088 STK38Q15208 465 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 LRRC23Q53EV4 343 aaPredicted RBP1.76□□□□□ -2.13
ITGB1-213ENST00000484088 FAM219BQ5XKK7 198 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 PDPK2PQ6A1A2 396 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 LEG1Q6P5S2 330 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 DPY19L2P2Q6ZN68 376 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 MIER3Q7Z3K6 550 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 SYVN1Q86TM6 617 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 LUZP1Q86V48 1076 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 STX12Q86Y82 276 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 KDM8Q8N371 416 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 SAMD12Q8N8I0 201 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 FAM133AQ8N9E0 248 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 FAM71CQ8NEG0 241 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 IPMKQ8NFU5 416 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 OR4F17Q8NGA8 305 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 OR6C4Q8NGE1 309 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 OR56B2PQ8NGI1 322 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 FAM81AQ8TBF8 368 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 ENKURQ8TC29 256 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 FNDC8Q8TC99 324 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 FBXO25Q8TCJ0 367 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 DDI1Q8WTU0 396 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 PHYHIPQ92561 330 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 C14orf79Q96F83 325 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 MSANTD3Q96H12 275 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 PIWIL1Q96J94 861 aaKnown RBP1.76□□□□□ -2.13
ITGB1-213ENST00000484088 C7orf34Q96L11 122 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 CEP19Q96LK0 163 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 FAM111AQ96PZ2 611 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 PSKH2Q96QS6 385 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 OR4F4Q96R69 305 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 TXN2Q99757 166 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 RIOK1Q9BRS2 568 aaKnown RBP1.76□□□□□ -2.13
ITGB1-213ENST00000484088 SIKE1Q9BRV8 207 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 TRIM51Q9BSJ1 452 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 GCOM2Q9BZD3 368 aaPredicted RBP1.76□□□□□ -2.13
ITGB1-213ENST00000484088 FAM107BQ9H098 131 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 FAM124BQ9H5Z6 455 aaPredicted RBP1.76□□□□□ -2.13
ITGB1-213ENST00000484088 HAUS4Q9H6D7 363 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 TMEM165Q9HC07 324 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 CRLF2Q9HC73 371 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 TM9SF3Q9HD45 589 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 RRAGDQ9NQL2 400 aaPredicted RBP1.76□□□□□ -2.13
ITGB1-213ENST00000484088 POLE3Q9NRF9 147 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.76□□□□□ -2.138e-6■□□□□ 9.8
ITGB1-213ENST00000484088 SLC39A1Q9NY26 324 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 ZNF581Q9P0T4 197 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 DHRS4-AS1Q9P1J3 65 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 ACTR3BQ9P1U1 418 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 CD300AQ9UGN4 299 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 PURGQ9UJV8 347 aaKnown RBP1.76□□□□□ -2.13
ITGB1-213ENST00000484088 SMARCA2P51531 1590 aa1.76□□□□□ -2.13
ITGB1-213ENST00000484088 PARD3Q8TEW0 1356 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.75□□□□□ -2.13
ITGB1-213ENST00000484088 IGHV3OR16-12A0A075B7B8 117 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 A0A087WWV3 80 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 A0A0U1RQV5 110 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 RGSL1A5PLK6 1076 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 LRRIQ3A6PVS8 624 aaPredicted RBP1.75□□□□□ -2.13
ITGB1-213ENST00000484088 ZNF879B4DU55 563 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 HSBP1L1C9JCN9 74 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 F8WDY8 70 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 H3BMH7 237 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 CYB561D2O14569 222 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 CASC3O15234 703 aaKnown RBP1.75□□□□□ -2.13
ITGB1-213ENST00000484088 CHADO15335 359 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 BCL2L11O43521 198 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 GMFGO60234 142 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 PEX11AO75192 247 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 SMIM24O75264 130 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 SRSF10O75494 262 aaKnown RBP1.75□□□□□ -2.13
ITGB1-213ENST00000484088 GOT2P00505 430 aaKnown RBP1.75□□□□□ -2.13
ITGB1-213ENST00000484088 MT-ATP6P00846 226 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 PROS1P07225 676 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 ASGR1P07306 291 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 IVLP07476 585 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 FCGR3AP08637 254 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 HOXB7P09629 217 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 POLR2MP0CAP2 368 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 CLUP10909 449 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 MBL2P11226 248 aaPredicted RBP1.75□□□□□ -2.13
ITGB1-213ENST00000484088 CCDC130P13994 396 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 GP9P14770 177 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 S100A1P23297 94 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 PTPN6P29350 595 aa1.75□□□□□ -2.13
ITGB1-213ENST00000484088 SPRP35270 261 aaPredicted RBP1.75□□□□□ -2.13
ITGB1-213ENST00000484088 MAGEA4P43358 317 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms