RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 RBM18Q96H35 190 aaKnown RBP8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 ARHGDIGQ99819 225 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 CHRNA10Q9GZZ6 450 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 SMOC1Q9H4F8 434 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 DUSP21Q9H596 190 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 MTHFD2LQ9H903 347 aaPredicted RBP8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 NECTIN3Q9NQS3 549 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 SEMA4GQ9NTN9 838 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZNF226Q9NYT6 803 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 FTSJ1Q9UET6 329 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 CSNK1G3Q9Y6M4 447 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 U3KQA8 63 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 ARRDC5A6NEK1 342 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 CPSF4LA6NMK7 179 aaKnown RBP8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 PATE3B3GLJ2 98 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 MAN1A2O60476 641 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 ABCB7O75027 752 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 TP53P04637 393 aaPredicted RBP8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 CFIP05156 583 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 PRG2P13727 222 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 PTNP21246 168 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 PCMT1P22061 227 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 MMP11P24347 488 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 POU1F1P28069 291 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 PRKAR1BP31321 381 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 RFX3P48380 749 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 ARRB1P49407 418 aaPredicted RBP8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 FOXL2P58012 376 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 EMX1Q04741 257 aaPredicted RBP8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 STX4Q12846 297 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 TARDBPQ13148 414 aaKnown RBP eCLIP8.21□□□□□ -1.098e-6■■■□□ 18.9
CDC42SE1-204ENST00000483763 NDUFA9Q16795 377 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 GARNL3Q5VVW2 1013 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 BROXQ5VW32 411 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 GUSBP11Q6P575 273 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZNF836Q6ZNA1 936 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 C11orf74Q86VG3 221 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 GALNT12Q8IXK2 581 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 OR4K5Q8NGD3 323 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 RHOXF1Q8NHV9 184 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 DIO2Q92813 273 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 HOXB13Q92826 284 aaPredicted RBP8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 CCDC74AQ96AQ1 378 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 PRRC1Q96M27 445 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 FNDC11Q9BVV2 318 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 LHPPQ9H008 270 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZNF556Q9HAH1 456 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 PRTFDC1Q9NRG1 225 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 DUSP22Q9NRW4 184 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 ATXN7L1Q9ULK2 861 aaPredicted RBP8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZNF443Q9Y2A4 671 aaPredicted RBP8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 HEMK1Q9Y5R4 338 aaPredicted RBP8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 HSPE1-MOB4S4R3N1 261 aa8.21□□□□□ -1.09
CDC42SE1-204ENST00000483763 A0A087WUU8 490 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 SYT5O00445 386 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 ZNF749O43361 778 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 DUX1O43812 170 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 INMTO95050 263 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 IGKV1D-16P01601 117 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 ALOX5P09917 674 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 GKN3PP0CG01 181 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 EPHA8P29322 1005 aaPredicted RBP8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 GPR3P46089 330 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 NUDT6P53370 316 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 EEF1A1P68104 462 aaKnown RBP8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 IGLV3-21P80748 117 aaPredicted RBP8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 HPCAP84074 193 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 ZNF267Q14586 743 aaPredicted RBP8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 NR1D2Q14995 579 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 NNATQ16517 81 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 HLA-BQ31612 363 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 TCTE1Q5JU00 501 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 GPR107Q5VW38 600 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 FAAH2Q6GMR7 532 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 GPR141Q7Z602 305 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 PLXDC1Q8IUK5 500 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 CLVS1Q8IUQ0 354 aaPredicted RBP8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 D2HGDHQ8N465 521 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 COX18Q8N8Q8 333 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 SAP25Q8TEE9 199 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 NODALQ96S42 347 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 CD180Q99467 661 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 CCDC90BQ9GZT6 254 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 CUTCQ9NTM9 273 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 CALML5Q9NZT1 146 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 SUSD2Q9UGT4 822 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 RSL24D1Q9UHA3 163 aaKnown RBP8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 TMCC3Q9ULS5 477 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 PCDHGA10Q9Y5H3 936 aa8.21□□□□□ -1.1
CDC42SE1-204ENST00000483763 MN1Q10571 1320 aaPredicted RBP8.2□□□□□ -1.1
CDC42SE1-204ENST00000483763 ZAR1LA6NP61 321 aa8.2□□□□□ -1.1
CDC42SE1-204ENST00000483763 FAAHO00519 579 aa8.2□□□□□ -1.1
CDC42SE1-204ENST00000483763 ADAM11O75078 769 aa8.2□□□□□ -1.1
CDC42SE1-204ENST00000483763 STX11O75558 287 aa8.2□□□□□ -1.1
CDC42SE1-204ENST00000483763 CYP7B1O75881 506 aa8.2□□□□□ -1.1
CDC42SE1-204ENST00000483763 KCNK2O95069 426 aa8.2□□□□□ -1.1
CDC42SE1-204ENST00000483763 ADAP00813 363 aa8.2□□□□□ -1.1
CDC42SE1-204ENST00000483763 RPS4Y1P22090 263 aaKnown RBP8.2□□□□□ -1.1
CDC42SE1-204ENST00000483763 C21orf33P30042 268 aaPredicted RBP8.2□□□□□ -1.1
CDC42SE1-204ENST00000483763 CNR2P34972 360 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms