RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 KCNH1O95259 989 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 UTS2O95399 124 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 IL33O95760 270 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 ACP2P11117 423 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 PRPS2P11908 318 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 BCKDHAP12694 445 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 CPN1P15169 458 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 ZNF708P17019 499 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 CAPN3P20807 821 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 CTSSP25774 331 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 CPOXP36551 454 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 HPCAL1P37235 193 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 CPA2P48052 419 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 RNF144AP50876 292 aaPredicted RBP9.48□□□□□ -0.89
CPSF4-212ENST00000482251 MANFP55145 182 aaKnown RBP9.48□□□□□ -0.89
CPSF4-212ENST00000482251 B3GALT5-AS1P59052 145 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 PSPHP78330 225 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 PDE7AQ13946 482 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 PTGR1Q14914 329 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 SF3B4Q15427 424 aaKnown RBP eCLIP9.48□□□□□ -0.892e-10■■■■■ 29.4
CPSF4-212ENST00000482251 UGT3A2Q3SY77 523 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 KRT71Q3SY84 523 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 XKR7Q5GH72 579 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 CCNJQ5T5M9 372 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 EMBQ6PCB8 327 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 P4HA3Q7Z4N8 544 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 ZAR1Q86SH2 424 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 FADS6Q8N9I5 356 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 NUP43Q8NFH3 380 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 ZPLD1Q8TCW7 415 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 CAVIN3Q969G5 261 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 CHMP6Q96FZ7 201 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 C16orf58Q96GQ5 468 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 C3orf30Q96M34 536 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 TBL1XR1Q9BZK7 514 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 CALHM2Q9HA72 323 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 EML4Q9HC35 981 aaKnown RBP9.48□□□□□ -0.89
CPSF4-212ENST00000482251 FAM120CQ9NX05 1096 aaKnown RBP9.48□□□□□ -0.89
CPSF4-212ENST00000482251 DNAJB12Q9NXW2 375 aaKnown RBP9.48□□□□□ -0.89
CPSF4-212ENST00000482251 ZNF629Q9UEG4 869 aaPredicted RBP9.48□□□□□ -0.89
CPSF4-212ENST00000482251 ABCG2Q9UNQ0 655 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 WBP11Q9Y2W2 641 aaKnown RBP9.48□□□□□ -0.89
CPSF4-212ENST00000482251 SNX8Q9Y5X2 465 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 CELSR1Q9NYQ6 3014 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 ANGPTL1O95841 491 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 TGM6O95932 706 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 BPGMP07738 259 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 OPRM1P35372 400 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 PSMD4P55036 377 aaKnown RBP9.47□□□□□ -0.89
CPSF4-212ENST00000482251 DSCR4P56555 118 aaPredicted RBP9.47□□□□□ -0.89
CPSF4-212ENST00000482251 SIRPAP78324 504 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 ZNF844Q08AG5 666 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 PDCD2Q16342 344 aaPredicted RBP9.47□□□□□ -0.89
CPSF4-212ENST00000482251 DUSP5Q16690 384 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 FLYWCH1Q4VC44 716 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 ATP6AP1LQ52LC2 224 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 FBXW10Q5XX13 1052 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 PPP4R4Q6NUP7 873 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 APOOLQ6UXV4 268 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 RNF165Q6ZSG1 346 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 KRTCAP2Q8N6L1 136 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 COX18Q8N8Q8 333 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 FNDC5Q8NAU1 212 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 SLC16A11Q8NCK7 471 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 PPP1R14CQ8TAE6 165 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 LINC01560Q8TB33 94 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 DUSP19Q8WTR2 217 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 DTNBP1Q96EV8 351 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 GIMAP5Q96F15 307 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 LRRC46Q96FV0 321 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 METTL2AQ96IZ6 378 aaKnown RBP9.47□□□□□ -0.89
CPSF4-212ENST00000482251 PPP3R2Q96LZ3 170 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 RBM24Q9BX46 236 aaKnown RBP9.47□□□□□ -0.89
CPSF4-212ENST00000482251 POLDIP3Q9BY77 421 aaKnown RBP9.47□□□□□ -0.89
CPSF4-212ENST00000482251 ROPN1BQ9BZX4 212 aaPredicted RBP9.47□□□□□ -0.89
CPSF4-212ENST00000482251 CLEC4MQ9H2X3 399 aaPredicted RBP9.47□□□□□ -0.89
CPSF4-212ENST00000482251 CENPHQ9H3R5 247 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 LIME1Q9H400 295 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 ROPN1Q9HAT0 212 aaPredicted RBP9.47□□□□□ -0.89
CPSF4-212ENST00000482251 C3orf14Q9HBI5 128 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 SIRT3Q9NTG7 399 aaPredicted RBP9.47□□□□□ -0.89
CPSF4-212ENST00000482251 ZCCHC3Q9NUD5 404 aaKnown RBP9.47□□□□□ -0.89
CPSF4-212ENST00000482251 FBXO34Q9NWN3 711 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 GALNT8Q9NY28 637 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 ZDHHC2Q9UIJ5 367 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 MRTO4Q9UKD2 239 aaKnown RBP9.47□□□□□ -0.89
CPSF4-212ENST00000482251 VDAC3Q9Y277 283 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 TMED5Q9Y3A6 229 aa9.47□□□□□ -0.89
CPSF4-212ENST00000482251 F8P00451 2351 aa9.46□□□□□ -0.89
CPSF4-212ENST00000482251 NPIPA5A0A0B4J1W7 369 aa9.46□□□□□ -0.9
CPSF4-212ENST00000482251 TUBAL3A6NHL2 446 aa9.46□□□□□ -0.9
CPSF4-212ENST00000482251 TMEM114B3SHH9 223 aa9.46□□□□□ -0.9
CPSF4-212ENST00000482251 NPIPA7E9PJI5 369 aa9.46□□□□□ -0.9
CPSF4-212ENST00000482251 SYT5O00445 386 aa9.46□□□□□ -0.9
CPSF4-212ENST00000482251 ITM2AO43736 263 aa9.46□□□□□ -0.9
CPSF4-212ENST00000482251 TYROBPO43914 113 aa9.46□□□□□ -0.9
CPSF4-212ENST00000482251 CTAG2O75638 210 aa9.46□□□□□ -0.9
CPSF4-212ENST00000482251 SMNDC1O75940 238 aaKnown RBP eCLIP9.46□□□□□ -0.91e-8■■■■■ 30.2
CPSF4-212ENST00000482251 NKX2-2O95096 273 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms