RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 PTGDR2Q9Y5Y4 395 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 ZNF780BQ9Y6R6 833 aa5.77□□□□□ -1.49
SF3B1-209ENST00000479532 FER1L5A0AVI2 2057 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 DCHS1Q96JQ0 3298 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 A0A087WV48 116 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 IDSB3KWA1 339 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 KPNA4O00629 521 aaPredicted RBP5.76□□□□□ -1.49
SF3B1-209ENST00000479532 PROM1O43490 865 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 TMPRSS11DO60235 418 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 OR10H2O60403 315 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 KLHL41O60662 606 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 ENTPD5O75356 428 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 KLF7O75840 302 aaPredicted RBP5.76□□□□□ -1.49
SF3B1-209ENST00000479532 AIFM1O95831 613 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 IFNA16P05015 189 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 IL3P08700 152 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 OCM2P0CE71 109 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 OCMP0CE72 109 aaPredicted RBP5.76□□□□□ -1.49
SF3B1-209ENST00000479532 PRKAR1AP10644 381 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 ICAM2P13598 275 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 ANPEPP15144 967 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 ZNF23P17027 643 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 TNNI3P19429 210 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 MMP11P24347 488 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 NTSP30990 170 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 GNALP38405 381 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 MC3RP41968 323 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 AQP5P55064 265 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 OR4D2P58180 307 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 SRSF3P84103 164 aaKnown RBP5.76□□□□□ -1.49
SF3B1-209ENST00000479532 PLIN5Q00G26 463 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 C2orf80Q0P641 193 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 CDC20Q12834 499 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 RGS21Q2M5E4 152 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 RFTN2Q52LD8 501 aaPredicted RBP5.76□□□□□ -1.49
SF3B1-209ENST00000479532 C6orf136Q5SQH8 315 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 IRAK1BP1Q5VVH5 260 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 METTL21CQ5VZV1 264 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 C18orf63Q68DL7 685 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 Q6ZSR9 355 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 MED25Q71SY5 747 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 CPEB2Q7Z5Q1 589 aaKnown RBP5.76□□□□□ -1.49
SF3B1-209ENST00000479532 CLNKQ7Z7G1 428 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 DHDDSQ86SQ9 333 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 LIX1Q8N485 282 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 NATD1Q8N6N6 113 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 CLEC1AQ8NC01 280 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 PLPP5Q8NEB5 264 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 OR4K14Q8NGD5 310 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 OR2T11Q8NH01 316 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 ACTRT2Q8TDY3 377 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 ADAMTS16Q8TE57 1224 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 GIPC3Q8TF64 312 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 C16orf78Q8WTQ4 265 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 TRUB1Q8WWH5 349 aaKnown RBP5.76□□□□□ -1.49
SF3B1-209ENST00000479532 DAZLQ92904 295 aaKnown RBP5.76□□□□□ -1.49
SF3B1-209ENST00000479532 TM4SF18Q96CE8 201 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 RBM18Q96H35 190 aaKnown RBP5.76□□□□□ -1.49
SF3B1-209ENST00000479532 RAX2Q96IS3 184 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 ART5Q96L15 291 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 FCRL1Q96LA6 429 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 RILPQ96NA2 401 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 CSF3RQ99062 836 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 ZBTB18Q99592 522 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 LPAR4Q99677 370 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 GPATCH1Q9BRR8 931 aaKnown RBP5.76□□□□□ -1.49
SF3B1-209ENST00000479532 C1orf50Q9BV19 199 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 ZNF717Q9BY31 904 aaPredicted RBP5.76□□□□□ -1.49
SF3B1-209ENST00000479532 NDEL1Q9GZM8 345 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 VN1R1Q9GZP7 353 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 MYNNQ9NPC7 610 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 TCF7L2Q9NQB0 619 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 LANCL2Q9NS86 450 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 ASIC5Q9NY37 505 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 EHD3Q9NZN3 535 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 KCMF1Q9P0J7 381 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 IL17BQ9UHF5 180 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 UTS2RQ9UKP6 389 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 POLHQ9Y253 713 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 MAN2B2Q9Y2E5 1009 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 DLGAP4Q9Y2H0 992 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 ATG4BQ9Y4P1 393 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 CCL27Q9Y4X3 112 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 ASB4Q9Y574 426 aa5.76□□□□□ -1.49
SF3B1-209ENST00000479532 MRPS18BQ9Y676 258 aaKnown RBP5.76□□□□□ -1.49
SF3B1-209ENST00000479532 CCDC88CQ9P219 2028 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 C15orf38-AP3S2A0A0A6YYH1 394 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 NSG1A0A0A6YYJ2 146 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 A0A0G2JND7 137 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 A0A1W2PR48 441 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 FAM172BPA6NC97 362 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 TRIM64CA6NLI5 447 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 FAM227AF5H4B4 570 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 BOLA2-SMG1P6H3BVE0 249 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 K7ENP7 123 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 CYR61O00622 381 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 SDHDO14521 159 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 UBDO15205 165 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 GYG2O15488 501 aa5.75□□□□□ -1.49
SF3B1-209ENST00000479532 LDB3O75112 727 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms