RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 SMAP2Q8WU79 429 aaPredicted RBP10.1□□□□□ -0.79
VPS52-217ENST00000478934 SLC25A46Q96AG3 418 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 C10orf90Q96M02 699 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 CCDC32Q9BV29 185 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 PINK1Q9BXM7 581 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 TMEM168Q9H0V1 697 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 MED20Q9H944 212 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 C3orf14Q9HBI5 128 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 RANGRFQ9HD47 186 aaPredicted RBP10.1□□□□□ -0.79
VPS52-217ENST00000478934 GDE1Q9NZC3 331 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 A0A0B4J293 547 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 SHISA3A0PJX4 238 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 PRSS38A1L453 326 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 MEIOCA2RUB1 952 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 SOCS6O14544 535 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 LDB3O75112 727 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 UBXN7O94888 489 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 ADH1BP00325 375 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 CCNYL3P0C7X3 344 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 MYL12AP19105 171 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 CD83Q01151 205 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 CSTF1Q05048 431 aaKnown RBP10.1□□□□□ -0.79
VPS52-217ENST00000478934 COX10Q12887 443 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 GPR68Q15743 365 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 MAPK14Q16539 360 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 SLC27A4Q6P1M0 643 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 CD300LDQ6UXZ3 194 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 FAM92BQ6ZTR7 304 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 LAPTM4BQ86VI4 370 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 MFSD9Q8NBP5 474 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 FLCNQ8NFG4 579 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 TEX47Q8TBZ9 253 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 TMEM163Q8TC26 289 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 CHAC2Q8WUX2 184 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 TP53INP1Q96A56 240 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 RNF31Q96EP0 1072 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 ZNF764Q96H86 408 aaPredicted RBP10.1□□□□□ -0.79
VPS52-217ENST00000478934 ST6GAL2Q96JF0 529 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 TBX5Q99593 518 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 KATNB1Q9BVA0 655 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 PITHD1Q9GZP4 211 aaPredicted RBP10.1□□□□□ -0.79
VPS52-217ENST00000478934 ZNF780BQ9Y6R6 833 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 DENND4AQ7Z401 1863 aa10.1□□□□□ -0.79
VPS52-217ENST00000478934 A0A1B0GVC2 190 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 A6NIN4 97 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 CD8B2A6NJW9 211 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 TTC36A6NLP5 189 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 CD8BP10966 210 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 ENDOUP21128 410 aaKnown RBP10.09□□□□□ -0.79
VPS52-217ENST00000478934 CMPK1P30085 196 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 MTNR1AP48039 350 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 WNT4P56705 351 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 RGS8P57771 180 aaPredicted RBP10.09□□□□□ -0.79
VPS52-217ENST00000478934 PRR5P85299 388 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 ENPP2Q13822 863 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 DUSP5Q16690 384 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 SLC35F1Q5T1Q4 408 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 ZNF776Q68DI1 518 aaPredicted RBP10.09□□□□□ -0.79
VPS52-217ENST00000478934 FCRLBQ6BAA4 426 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 SYCE2Q6PIF2 218 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 ZC3H14Q6PJT7 736 aaKnown RBP10.09□□□□□ -0.79
VPS52-217ENST00000478934 TMEM64Q6YI46 380 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 HSDL2Q6YN16 418 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 FRRS1Q6ZNA5 592 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 MTSS1LQ765P7 747 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 GDF7Q7Z4P5 450 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 ZNF761Q86XN6 746 aaPredicted RBP10.09□□□□□ -0.79
VPS52-217ENST00000478934 RAB43Q86YS6 212 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 TTLQ8NG68 377 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 OR5T3Q8NGG3 340 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 OR56A1Q8NGH5 318 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 ADAMTS15Q8TE58 950 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 NACC2Q96BF6 587 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 EFHD2Q96C19 240 aaPredicted RBP10.09□□□□□ -0.79
VPS52-217ENST00000478934 TMCO6Q96DC7 493 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 MCHR1Q99705 422 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 ARHGDIGQ99819 225 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 STARD5Q9NSY2 213 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 WBP1LQ9NX94 342 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 SLC13A4Q9UKG4 626 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 NDRG2Q9UN36 371 aaKnown RBP10.09□□□□□ -0.79
VPS52-217ENST00000478934 LIPT1Q9Y234 373 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 RWDD3Q9Y3V2 267 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 NOX1Q9Y5S8 564 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 PLRG1O43660 514 aaKnown RBP10.09□□□□□ -0.79
VPS52-217ENST00000478934 HPGDSO60760 199 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 CTSBP07858 339 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 NR2F6P10588 404 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 ACP2P11117 423 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 POLR2CP19387 275 aaPredicted RBP10.09□□□□□ -0.79
VPS52-217ENST00000478934 AHRP35869 848 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 RAB25P57735 213 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 ERVK-21P61565 698 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 ZFP69Q49AA0 526 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 PDZK1Q5T2W1 519 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 ZNF544Q6NX49 715 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 SMARCD3Q6STE5 483 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 WDR88Q6ZMY6 472 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 PLEKHM3Q6ZWE6 761 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 RRM2BQ7LG56 351 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms