RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 MAP3K8P41279 467 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 RNF144AP50876 292 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-215ENST00000478531 ARFIP2P53365 341 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 PNLIPRP2P54317 469 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 RBPJQ06330 500 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 DCST2Q5T1A1 773 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 OR5M10Q6IEU7 315 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 ZCCHC12Q6PEW1 402 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 SLC2A7Q6PXP3 512 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 ZAR1Q86SH2 424 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 GHDCQ8N2G8 530 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 FAM109AQ8N4B1 249 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 TRIML2Q8N7C3 387 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 OR1J4Q8NGS1 313 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 ITCHQ96J02 903 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 GNRHR2Q96P88 292 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 OR7D2Q96RA2 312 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 BTBD2Q9BX70 525 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 ANGPTL4Q9BY76 406 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 FAM107BQ9H098 131 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 OR51I1Q9H343 314 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 SERHL2Q9H4I8 314 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 CCDC134Q9H6E4 229 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 LDAHQ9H6V9 325 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 EXO5Q9H790 373 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 RMND5AQ9H871 391 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 DUSP22Q9NRW4 184 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 SLC6A13Q9NSD5 602 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 FBXO34Q9NWN3 711 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 GIN1Q9NXP7 522 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 TNFRSF10DQ9UBN6 386 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 WIF1Q9Y5W5 379 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 KCNE3Q9Y6H6 103 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 NPIPA5A0A0B4J1W7 369 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 A0A1B0GTH9 108 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 ANKRD33BA6NCL7 494 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 NPIPA7E9PJI5 369 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 SLC19A2O60779 497 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 SNX4O95219 450 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 NPIPA8P0DM63 369 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 ATP6V1C1P21283 382 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 PTGDSP41222 190 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 TRPC1P48995 793 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 KHKP50053 298 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 ATP4BP51164 291 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 LRRC74AQ0VAA2 488 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 SNTA1Q13424 505 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 RCAN2Q14206 197 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 GRAMD1BQ3KR37 738 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 GTDC1Q4AE62 458 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 KRTCAP3Q53RY4 240 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 C1QL3Q5VWW1 255 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 SLC30A6Q6NXT4 461 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 C16orf62Q7Z3J2 963 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 RNF130Q86XS8 419 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 SPPL2CQ8IUH8 684 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 GATSQ8NAP1 163 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 HOXB13Q92826 284 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-215ENST00000478531 RAB8BQ92930 207 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 SPDL1Q96EA4 605 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 NEURL3Q96EH8 262 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 AURKBQ96GD4 344 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-215ENST00000478531 POM121Q96HA1 1249 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 STACQ99469 402 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 G6PC3Q9BUM1 346 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 TBL1XR1Q9BZK7 514 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 SLC6A15Q9H2J7 730 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 PIGUQ9H490 435 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 ZDHHC11Q9H8X9 412 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 SERHLQ9NQF3 203 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 PPP4R1LQ9P1A2 415 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 TINAGQ9UJW2 476 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 C15orf41Q9Y2V0 281 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 PCDHGB3Q9Y5G1 929 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 HRH3Q9Y5N1 445 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 HEATR5AQ86XA9 2040 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 ICE1Q9Y2F5 2266 aa6.3□□□□□ -1.4
BRCA1-215ENST00000478531 TRGV8A0A0C4DH27 118 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 SNPHO15079 494 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 AGFG2O95081 481 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 TPOP07202 933 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 OR12D1P0DN82 309 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 HPGDP15428 266 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 CD1EP15812 388 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 CAPN3P20807 821 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 ELAVL4P26378 380 aaKnown RBP6.29□□□□□ -1.4
BRCA1-215ENST00000478531 MRPL19P49406 292 aaKnown RBP6.29□□□□□ -1.4
BRCA1-215ENST00000478531 MAN2A2P49641 1150 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 CLK3P49761 638 aaKnown RBP6.29□□□□□ -1.4
BRCA1-215ENST00000478531 SLC10A1Q14973 349 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 FLYWCH1Q4VC44 716 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.29□□□□□ -1.4
BRCA1-215ENST00000478531 FNDC7Q5VTL7 733 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 SAXO2Q658L1 398 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 TIGD3Q6B0B8 471 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 TMEM81Q6P7N7 255 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 BLOC1S3Q6QNY0 202 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 C3P1Q6ZMU1 363 aa6.29□□□□□ -1.4
BRCA1-215ENST00000478531 BNC2Q6ZN30 1099 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-215ENST00000478531 MSANTD1Q6ZTZ1 278 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms