RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 MSLNQ13421 630 aaPredicted RBP3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 CYLC2Q14093 348 aaPredicted RBP3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 EMC2Q15006 297 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 P2RY14Q15391 338 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 CARTPTQ16568 116 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 MPPE1Q53F39 396 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 FBXO48Q5FWF7 155 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 RABGAP1LQ5R372 815 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 PHYHD1Q5SRE7 291 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 REP15Q6BDI9 236 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 FAM159AQ6UWV7 190 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 PAQR9Q6ZVX9 377 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 EFL1Q7Z2Z2 1120 aaKnown RBP3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 FAM228AQ86W67 206 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 MARCH9Q86YJ5 346 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 HPS6Q86YV9 775 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 CCDC71Q8IV32 467 aaPredicted RBP3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 SPAG16Q8N0X2 631 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 SPERTQ8NA61 448 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 OR1K1Q8NGR3 316 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 OR4L1Q8NH43 312 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 RLN3Q8WXF3 142 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 OSTF1Q92882 214 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 RASD2Q96D21 266 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 C11orf24Q96F05 449 aaPredicted RBP3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 FTHL17Q9BXU8 183 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 CRNKL1Q9BZJ0 848 aaKnown RBP3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 SLC26A1Q9H2B4 701 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 GANQ9H2C0 597 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 CXXC4Q9H2H0 198 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 EXO5Q9H790 373 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 WDR76Q9H967 626 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 CALHM2Q9HA72 323 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 GPR83Q9NYM4 423 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 RDH8Q9NYR8 311 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 ZNF581Q9P0T4 197 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 EIF3KQ9UBQ5 218 aaKnown RBP3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 KIAA1257Q9ULG3 409 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 MRPS33Q9Y291 106 aaKnown RBP3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 SF3B1O75533 1304 aaKnown RBP eCLIP3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 PLEKHG2Q9H7P9 1386 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 NPC1L1Q9UHC9 1359 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 FGD5Q6ZNL6 1462 aa3.07□□□□□ -1.92
SMARCA1-204ENST00000478420 A0A075B6Q4 140 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 SH3PXD2BA1X283 911 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 ZNF840PA6NDX5 716 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 OR52A4PA6NMU1 304 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 YJEFN3A6XGL0 299 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 ANKRD30BLA7E2S9 258 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 FOXI3A8MTJ6 420 aaPredicted RBP3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 RNF212BA8MTL3 300 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 MEI4A8MW99 385 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 LRRTM2O43300 516 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 NME2P1O60361 137 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 NMT2O60551 498 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 STAMBPO95630 424 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 TXNDC12O95881 172 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 MBD3O95983 291 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 PROS1P07225 676 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 SFTPBP07988 381 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 MELTFP08582 738 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 RRASP10301 218 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 MBL2P11226 248 aaPredicted RBP3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 FOSL2P15408 326 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 TNNI3P19429 210 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 CALML3P27482 149 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 MARCKSP29966 332 aaPredicted RBP3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 PPP2R1BP30154 601 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 ELK3P41970 407 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 MATKP42679 507 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 RGS4P49798 205 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 CSRP3P50461 194 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 CCL11P51671 97 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 SUCLG1P53597 346 aaKnown RBP3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 GEMP55040 296 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 RPS8P62241 208 aaKnown RBP3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 CDKL1Q00532 357 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 SPAG1Q07617 926 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 PEX6Q13608 980 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 KRT31Q15323 416 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 CCL14Q16627 93 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 PCK2Q16822 640 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 KRT71Q3SY84 523 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 NHLRC3Q5JS37 347 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 ARMC12Q5T9G4 340 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 RTL6Q6ICC9 239 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 NANOGNBQ7Z5D8 188 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 TMCO2Q7Z6W1 182 aaPredicted RBP3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 ITIH5Q86UX2 942 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 GCNT2Q8N0V5 402 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 PARP8Q8N3A8 854 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 OR8K3Q8NH51 312 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 RAB3IL1Q8TBN0 382 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 FBXO25Q8TCJ0 367 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 PARD3Q8TEW0 1356 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 ITLN1Q8WWA0 313 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 STARD8Q92502 1023 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 DHTKD1Q96HY7 919 aaPredicted RBP3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 SENP8Q96LD8 212 aa3.06□□□□□ -1.92
SMARCA1-204ENST00000478420 MTG1Q9BT17 334 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms