RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	MAD2L1	Q13257	205 aa	Predicted RBP	12.53	□□□□□ -0.4
HDAC7-222	ENST00000477937	MLC1	Q15049	377 aa		12.53	□□□□□ -0.4
HDAC7-222	ENST00000477937	CHI3L2	Q15782	390 aa		12.53	□□□□□ -0.4
HDAC7-222	ENST00000477937	IL23R	Q5VWK5	629 aa		12.53	□□□□□ -0.4
HDAC7-222	ENST00000477937	ZCCHC12	Q6PEW1	402 aa		12.53	□□□□□ -0.4
HDAC7-222	ENST00000477937	NATD1	Q8N6N6	113 aa		12.53	□□□□□ -0.4
HDAC7-222	ENST00000477937	OR7A2P	Q8NGA2	310 aa		12.53	□□□□□ -0.4
HDAC7-222	ENST00000477937	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	12.53	□□□□□ -0.4
HDAC7-222	ENST00000477937	PIK3R3	Q92569	461 aa		12.53	□□□□□ -0.4
HDAC7-222	ENST00000477937	SLC9A6	Q92581	669 aa		12.53	□□□□□ -0.4
HDAC7-222	ENST00000477937	HOXB13	Q92826	284 aa	Predicted RBP	12.53	□□□□□ -0.4
HDAC7-222	ENST00000477937	RMND5B	Q96G75	393 aa	Predicted RBP	12.53	□□□□□ -0.4
HDAC7-222	ENST00000477937	SFXN2	Q96NB2	322 aa		12.53	□□□□□ -0.4
HDAC7-222	ENST00000477937	PRPF18	Q99633	342 aa	Known RBP	12.53	□□□□□ -0.4
HDAC7-222	ENST00000477937	C1orf50	Q9BV19	199 aa		12.53	□□□□□ -0.4
HDAC7-222	ENST00000477937	TBL1XR1	Q9BZK7	514 aa		12.53	□□□□□ -0.4
HDAC7-222	ENST00000477937	PTGES2	Q9H7Z7	377 aa		12.53	□□□□□ -0.4
HDAC7-222	ENST00000477937	ATAD3A	Q9NVI7	634 aa		12.53	□□□□□ -0.4
HDAC7-222	ENST00000477937	KCNN3	Q9UGI6	736 aa		12.53	□□□□□ -0.4
HDAC7-222	ENST00000477937	RPH3A	Q9Y2J0	694 aa	Predicted RBP	12.53	□□□□□ -0.4
HDAC7-222	ENST00000477937	LRBA	P50851	2863 aa		12.52	□□□□□ -0.4
HDAC7-222	ENST00000477937	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937		A0A1W2PRB8	838 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	GXYLT2	A0PJZ3	443 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937		H0Y3Z8	333 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	SYT5	O00445	386 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	ITM2A	O43736	263 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	SNUPN	O95149	360 aa	Known RBP	12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	ZWINT	O95229	277 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	MYZAP	P0CAP1	466 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	EFNA1	P20827	205 aa	Predicted RBP	12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	PRPS1L1	P21108	318 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	STAR	P49675	285 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	LHX2	P50458	406 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	ASCL1	P50553	236 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	ABCE1	P61221	599 aa	Known RBP	12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	C17orf67	Q0P5P2	114 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	STX5	Q13190	355 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	PTGR1	Q14914	329 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	CPTP	Q5TA50	214 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	CES4A	Q5XG92	561 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	MARCH3	Q86UD3	253 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	FADS6	Q8N9I5	356 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	NAXE	Q8NCW5	288 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	OR2M3	Q8NG83	312 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	DUSP19	Q8WTR2	217 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	GIMAP5	Q96F15	307 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	ZIM3	Q96PE6	472 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	TUBA1C	Q9BQE3	449 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	ZNF559	Q9BR84	538 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	KCNK9	Q9NPC2	374 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	FLRT3	Q9NZU0	649 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	MED11	Q9P086	117 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	EIF3L	Q9Y262	564 aa	Known RBP	12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	ACTL7B	Q9Y614	415 aa		12.52	□□□□□ -0.41
HDAC7-222	ENST00000477937	ABCA12	Q86UK0	2595 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	MPDZ	O75970	2070 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	FBN2	P35556	2912 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	C17orf51	A8MQB3	221 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937		B4DXG7	233 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	IGKV1D-16	P01601	117 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	ALOX5	P09917	674 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	ACP2	P11117	423 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	LAMP1	P11279	417 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	HK1	P19367	917 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	TCEA1	P23193	301 aa	Known RBP	12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	CTSS	P25774	331 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	OPRM1	P35372	400 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	PEX19	P40855	299 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	PRIM2	P49643	509 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	ZNF136	P52737	540 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	DGKQ	P52824	942 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	DLX5	P56178	289 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	EMX2	Q04743	252 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	MYBPH	Q13203	477 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	GANAB	Q14697	944 aa	Known RBP	12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	BCL2A1	Q16548	175 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	LSM12	Q3MHD2	195 aa	Known RBP	12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	TNFAIP8L3	Q5GJ75	292 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	MFSD12	Q6NUT3	480 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	ARSK	Q6UWY0	536 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	KIRREL3	Q8IZU9	778 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	RELL2	Q8NC24	303 aa	Predicted RBP	12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	SLC16A11	Q8NCK7	471 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	OR5P2	Q8WZ92	322 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	FAM120B	Q96EK7	910 aa	Known RBP	12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	PGM2	Q96G03	612 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	ZFP3	Q96NJ6	502 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	UCN2	Q96RP3	112 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	TM9SF2	Q99805	663 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	RTN4R	Q9BZR6	473 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	HHATL	Q9HCP6	504 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	SIRT3	Q9NTG7	399 aa	Predicted RBP	12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	ZCCHC3	Q9NUD5	404 aa	Known RBP	12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	NOP53	Q9NZM5	478 aa	Known RBP	12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	FOXD3	Q9UJU5	478 aa	Predicted RBP	12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	RAP2C	Q9Y3L5	183 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	SNX8	Q9Y5X2	465 aa		12.51	□□□□□ -0.41
HDAC7-222	ENST00000477937	CLCA1	A8K7I4	914 aa		12.5	□□□□□ -0.41

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