RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-210	ENST00000477625	DPP4	P27487	766 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	TIMP3	P35625	211 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	GFRA1	P56159	465 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	CLDN8	P56748	225 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	C21orf58	P58505	322 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	PDCD2	Q16342	344 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	LSM12	Q3MHD2	195 aa	Known RBP	11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	BEND6	Q5SZJ8	279 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	HHAT	Q5VTY9	493 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	NSUN5P2	Q63ZY6	315 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	MFSD12	Q6NUT3	480 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	AAGAB	Q6PD74	315 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	ENPP6	Q6UWR7	440 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	MEX3B	Q6ZN04	569 aa	Known RBP	11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	GDF7	Q7Z4P5	450 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	IFNE	Q86WN2	208 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	ZNF295-AS1	Q8N0V1	137 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	FADS6	Q8N9I5	356 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	SLC16A11	Q8NCK7	471 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	TNIP2	Q8NFZ5	429 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	OR4K17	Q8NGC6	315 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	PSMA8	Q8TAA3	256 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	ZPLD1	Q8TCW7	415 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	DUSP19	Q8WTR2	217 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	NUDT8	Q8WV74	236 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	SLC9A6	Q92581	669 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	FAM120B	Q96EK7	910 aa	Known RBP	11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	RMND5B	Q96G75	393 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	C16orf58	Q96GQ5	468 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	PPP1R36	Q96LQ0	422 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	RTN4R	Q9BZR6	473 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	AKTIP	Q9H8T0	292 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	SIRT3	Q9NTG7	399 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	ASIC5	Q9NY37	505 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	NOP53	Q9NZM5	478 aa	Known RBP	11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	PPP4R1L	Q9P1A2	415 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	HAO1	Q9UJM8	370 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	ABCA12	Q86UK0	2595 aa		11.12	□□□□□ -0.63
PTPN7-210	ENST00000477625	APC	P25054	2843 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	TMEM120B	A0PK00	339 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	C17orf51	A8MQB3	221 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	KDM4E	B2RXH2	506 aa	Predicted RBP	11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	KCNK2	O95069	426 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	ALOX5	P09917	674 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	ACP2	P11117	423 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	IGFBP2	P18065	325 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	CHM	P24386	653 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	MSX1	P28360	303 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	CEACAM8	P31997	349 aa	Predicted RBP	11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	PRIM2	P49643	509 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	SLC18A1	P54219	525 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	DIO3	P55073	304 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	DSCR4	P56555	118 aa	Predicted RBP	11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	WNT3	P56703	355 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	RCAN2	Q14206	197 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	DUSP5	Q16690	384 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	SLC25A35	Q3KQZ1	300 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	EXOSC6	Q5RKV6	272 aa	Known RBP	11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	MARCH3	Q86UD3	253 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	ANKRD42	Q8N9B4	389 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	OR2M3	Q8NG83	312 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	FAM110B	Q8TC76	370 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	SFXN2	Q96NB2	322 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	TRIB1	Q96RU8	372 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	TBL1XR1	Q9BZK7	514 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	BHLHE41	Q9C0J9	482 aa	Predicted RBP	11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	DSN1	Q9H410	356 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	CALHM2	Q9HA72	323 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	ZCCHC3	Q9NUD5	404 aa	Known RBP	11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	GIN1	Q9NXP7	522 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	MED11	Q9P086	117 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	ZNF629	Q9UEG4	869 aa	Predicted RBP	11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	DKKL1	Q9UK85	242 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	RPH3A	Q9Y2J0	694 aa	Predicted RBP	11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	SNX8	Q9Y5X2	465 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	LRBA	P50851	2863 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	CSMD1	Q96PZ7	3565 aa		11.11	□□□□□ -0.63
PTPN7-210	ENST00000477625	C6orf47	O95873	294 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	IL2RA	P01589	272 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	HMGN2	P05204	90 aa	Known RBP	11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	SSTR2	P30874	369 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	CCT3	P49368	545 aa	Known RBP	11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	STAR	P49675	285 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	WDR4	P57081	412 aa	Known RBP	11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	SRY	Q05066	204 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	C17orf67	Q0P5P2	114 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	BST1	Q10588	318 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	STX5	Q13190	355 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	BCL2A1	Q16548	175 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	PGS1	Q32NB8	556 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	GRAMD1B	Q3KR37	738 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	FIGNL1	Q6PIW4	674 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	APOOL	Q6UXV4	268 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	CAMKMT	Q7Z624	323 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	LRRC34	Q8IZ02	419 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	NAXE	Q8NCW5	288 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	OR4C3	Q8NH37	302 aa		11.1	□□□□□ -0.63
PTPN7-210	ENST00000477625	FBXO30	Q8TB52	745 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms