RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 SLC25A12O75746 678 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 NEURL1O76050 574 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 NR2F1P10589 423 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 CYP4B1P13584 511 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 TNFSF10P50591 281 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 PNLIPRP2P54317 469 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 PSME3P61289 254 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 ARHGAP11BQ3KRB8 267 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 DESI1Q6ICB0 168 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 C16orf89Q6UX73 402 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 OLIG3Q7RTU3 272 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 ZAR1Q86SH2 424 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 PGAM4Q8N0Y7 254 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 ANKFN1Q8N957 763 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 GOLM1Q8NBJ4 401 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 PSD4Q8NDX1 1056 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 HAS2Q92819 552 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 HGDQ93099 445 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 SGCZQ96LD1 299 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 HOPXQ9BPY8 73 aaPredicted RBP14.08□□□□□ -0.16
SEC13-215ENST00000477547 ZNF350Q9GZX5 532 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 KAT8Q9H7Z6 458 aaKnown RBP14.08□□□□□ -0.16
SEC13-215ENST00000477547 A4GALTQ9NPC4 353 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 SPAG4Q9NPE6 437 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 TIMMDC1Q9NPL8 285 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 FBXO34Q9NWN3 711 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 LIPT1Q9Y234 373 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 L3MBTL1Q9Y468 752 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 FLNCQ14315 2725 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 UNC79Q9P2D8 2635 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 PRAMEF27A3QJZ7 478 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 PRAMEF25A6NGN4 478 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 NME4O00746 187 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 KIAA0513O60268 411 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 STX11O75558 287 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 UTS2O95399 124 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 H6PDO95479 791 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 CHRM4P08173 479 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 T-ENOLP0DO92 83 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 CCL3P10147 92 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 ARAFP10398 606 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 RPP38P78345 283 aaKnown RBP14.07□□□□□ -0.16
SEC13-215ENST00000477547 SLC25A3Q00325 362 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 SYPL1Q16563 259 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 FLYWCH1Q4VC44 716 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 PRAMEF20Q5VT98 475 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 SPINK14Q6IE38 97 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 NUP54Q7Z3B4 507 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 MDGA2Q7Z553 956 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 SERPINA11Q86U17 422 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 ZNF227Q86WZ6 799 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 RBM15BQ8NDT2 890 aaKnown RBP14.07□□□□□ -0.16
SEC13-215ENST00000477547 CATSPER1Q8NEC5 780 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 OR10A6Q8NH74 314 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 FAM110BQ8TC76 370 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 SPPL2AQ8TCT8 520 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 MAL2Q969L2 176 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 TMEM19Q96HH6 336 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 SDF2Q99470 211 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 ECSITQ9BQ95 431 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 HES7Q9BYE0 225 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 METTL7AQ9H8H3 244 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 KLHL1Q9NR64 748 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 CMTM6Q9NX76 183 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 FLRT3Q9NZU0 649 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.07□□□□□ -0.16
SEC13-215ENST00000477547 WDR45Q9Y484 360 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 CHCHD2Q9Y6H1 151 aaPredicted RBP14.07□□□□□ -0.16
SEC13-215ENST00000477547 NCKAP5O14513 1909 aa14.07□□□□□ -0.16
SEC13-215ENST00000477547 NPIPA5A0A0B4J1W7 369 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 TRAV17A0A0B4J275 112 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 FAM220BPB1ANY3 271 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 B2RBV5 119 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 C5orf58C9J3I9 102 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 NPIPA7E9PJI5 369 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 NPIPA8P0DM63 369 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 SFTPCP11686 197 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 CD46P15529 392 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 DCTP40126 519 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 CRISP3P54108 245 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 GNA13Q14344 377 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 GRAMD1BQ3KR37 738 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 ZNF766Q5HY98 468 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 RPS26P11Q5JNZ5 115 aaPredicted RBP14.06□□□□□ -0.16
SEC13-215ENST00000477547 C6orf89Q6UWU4 347 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 FRRS1Q6ZNA5 592 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 NET1Q7Z628 596 aaPredicted RBP14.06□□□□□ -0.16
SEC13-215ENST00000477547 SLC15A3Q8IY34 581 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 ZZZ3Q8IYH5 903 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 FBXW8Q8N3Y1 598 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 RBMXL3Q8N7X1 1067 aaKnown RBP14.06□□□□□ -0.16
SEC13-215ENST00000477547 C11orf65Q8NCR3 313 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 NFKBIDQ8NI38 313 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 PAQR8Q8TEZ7 354 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 SLC38A5Q8WUX1 472 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 TMCO6Q96DC7 493 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 TRNT1Q96Q11 434 aaKnown RBP14.06□□□□□ -0.16
SEC13-215ENST00000477547 NODALQ96S42 347 aa14.06□□□□□ -0.16
SEC13-215ENST00000477547 SECISBP2Q96T21 854 aaKnown RBP14.06□□□□□ -0.16
SEC13-215ENST00000477547 SPATA9Q9BWV2 254 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms