RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 GLT8D2Q9H1C3 349 aa2.4□□□□□ -2.03
TARDBP-208ENST00000477447 NGBQ9NPG2 151 aa2.4□□□□□ -2.03
TARDBP-208ENST00000477447 APOBEC3BQ9UH17 382 aaKnown RBP2.4□□□□□ -2.03
TARDBP-208ENST00000477447 ODF2LQ9ULJ1 636 aa2.4□□□□□ -2.03
TARDBP-208ENST00000477447 CELA1Q9UNI1 258 aa2.4□□□□□ -2.03
TARDBP-208ENST00000477447 DUSP12Q9UNI6 340 aa2.4□□□□□ -2.03
TARDBP-208ENST00000477447 ZNF256Q9Y2P7 627 aaPredicted RBP2.4□□□□□ -2.03
TARDBP-208ENST00000477447 CROCCQ5TZA2 2017 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 IGLV8-61A0A075B6I0 122 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 FAM230AA0A1W2PPH8 454 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 KRTAP9-6A8MVA2 160 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 FAM220BPB1ANY3 271 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 HDAC3O15379 428 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 RAMP1O60894 148 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 CA3P07451 260 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 P0C879 139 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 KRTAP5-9P26371 169 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 MAPK3P27361 379 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-208ENST00000477447 RPA1P27694 616 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 ASMTP46597 345 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 RGRP47804 291 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 TRPC1P48995 793 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 RPS8P62241 208 aaKnown RBP2.39□□□□□ -2.03
TARDBP-208ENST00000477447 SPP2Q13103 211 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 CEBPEQ15744 281 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 ZNF79Q15937 498 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 CYP51A1Q16850 503 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 C9orf129Q5T035 196 aaKnown RBP2.39□□□□□ -2.03
TARDBP-208ENST00000477447 ISLR2Q6UXK2 745 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 PRR22Q8IZ63 422 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 CERS5Q8N5B7 392 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 CSNK1A1LQ8N752 337 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 BCORP1Q8N888 145 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 OR8H1Q8NGG4 311 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 UPRTQ96BW1 309 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 KCNK16Q96T55 309 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 NFKBIZQ9BYH8 718 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 C1orf21Q9H246 121 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 HSD3B7Q9H2F3 369 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 GPN2Q9H9Y4 310 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-208ENST00000477447 PNO1Q9NRX1 252 aaKnown RBP2.39□□□□□ -2.03
TARDBP-208ENST00000477447 RBM28Q9NW13 759 aaKnown RBP2.39□□□□□ -2.03
TARDBP-208ENST00000477447 EHFQ9NZC4 300 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 ATP6V1HQ9UI12 483 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 HOOK1Q9UJC3 728 aaKnown RBP2.39□□□□□ -2.03
TARDBP-208ENST00000477447 USP6P35125 1406 aa2.39□□□□□ -2.03
TARDBP-208ENST00000477447 SAGE2PA6NJ88 616 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 ZFP92A6NM28 416 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 ANKRD30BLA7E2S9 258 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 WASHC1A8K0Z3 465 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 WASH3PC4AMC7 463 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 LATO43561 262 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 ZNF254O75437 659 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 TOM1L1O75674 476 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 STAM2O75886 525 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 PTBP3O95758 552 aaKnown RBP2.38□□□□□ -2.03
TARDBP-208ENST00000477447 ANXA3P12429 323 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 ARF4P18085 180 aaPredicted RBP2.38□□□□□ -2.03
TARDBP-208ENST00000477447 FUT1P19526 365 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 RPL4P36578 427 aaKnown RBP2.38□□□□□ -2.03
TARDBP-208ENST00000477447 OR3A4PP47883 348 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 OSTNP61366 133 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 RFTN1Q14699 578 aaPredicted RBP2.38□□□□□ -2.03
TARDBP-208ENST00000477447 CDC37Q16543 378 aaPredicted RBP2.38□□□□□ -2.03
TARDBP-208ENST00000477447 ISXQ2M1V0 245 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 PARP10Q53GL7 1025 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 TEX44Q53QW1 395 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 SCYL2Q6P3W7 929 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 WASH2PQ6VEQ5 465 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 MOB1BQ7L9L4 216 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 ERASQ7Z444 233 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 IFNEQ86WN2 208 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 MISPQ8IVT2 679 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 BPIFB2Q8N4F0 458 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 ANKRD20A12PQ8NF67 263 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 OR52B4Q8NGK2 314 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 ZNF564Q8TBZ8 553 aaPredicted RBP2.38□□□□□ -2.03
TARDBP-208ENST00000477447 PSMG2Q969U7 264 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 PINX1Q96BK5 328 aaKnown RBP2.38□□□□□ -2.03
TARDBP-208ENST00000477447 PHYHIPLQ96FC7 376 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 TMEM80Q96HE8 168 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 B3GALT6Q96L58 329 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 MAGEB18Q96M61 343 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 C19orf24Q9BVV8 132 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 VAT1LQ9HCJ6 419 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 ABCB10Q9NRK6 738 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 UTP6Q9NYH9 597 aaKnown RBP2.38□□□□□ -2.03
TARDBP-208ENST00000477447 IL17CQ9P0M4 197 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 GALPQ9UBC7 116 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 ABCG2Q9UNQ0 655 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 FOXJ3Q9UPW0 622 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 CLCA3PQ9Y6N3 262 aa2.38□□□□□ -2.03
TARDBP-208ENST00000477447 GPRASP1Q5JY77 1395 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 EPOPA6NHQ4 379 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 ZSCAN5BA6NJL1 495 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 E9PLD3 99 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 CDX4O14627 284 aaPredicted RBP2.37□□□□□ -2.03
TARDBP-208ENST00000477447 PRPSAP2O60256 369 aa2.37□□□□□ -2.03
TARDBP-208ENST00000477447 SERF1AO75920 110 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms