RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 SLX4IPQ5VYV7 408 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 HSD11B1LQ7Z5J1 315 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 CEACAM19Q7Z692 300 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 ANKRD37Q7Z713 158 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 PARGQ86W56 976 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 HIPK1Q86Z02 1210 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 HSCBQ8IWL3 235 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 C1orf147Q96MC9 270 aaPredicted RBP4.62□□□□□ -1.67
VPS50-212ENST00000476413 RMND5AQ9H871 391 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 CLEC5AQ9NY25 188 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 GALPQ9UBC7 116 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 PRODH2Q9UF12 536 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 GRIN2DO15399 1336 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 RALGAPA1Q6GYQ0 2036 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 CLDN5O00501 218 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 SH3BGRLO75368 114 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 SERPINB2P05120 415 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 ALPIP09923 528 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 FAM200BP0CF97 657 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 SDC1P18827 310 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 GATA2P23769 480 aaPredicted RBP4.61□□□□□ -1.67
VPS50-212ENST00000476413 PLOD1Q02809 727 aaPredicted RBP4.61□□□□□ -1.67
VPS50-212ENST00000476413 CAMK4Q16566 473 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 PPP1R3AQ16821 1122 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 CCDC57Q2TAC2 916 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 CNPY1Q3B7I2 92 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 CELF3Q5SZQ8 465 aaKnown RBP4.61□□□□□ -1.67
VPS50-212ENST00000476413 FAM120AOSQ5T036 256 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 LGSNQ5TDP6 509 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 SEL1L3Q68CR1 1132 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 ZNF600Q6ZNG1 722 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 LANCL3Q6ZV70 420 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 ZNF485Q8NCK3 441 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 M1APQ8TC57 530 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 TOMM40LQ969M1 308 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 TADA1Q96BN2 335 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 MCCC1Q96RQ3 725 aaPredicted RBP4.61□□□□□ -1.67
VPS50-212ENST00000476413 TXN2Q99757 166 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 FEM1AQ9BSK4 669 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 CRACR2AQ9BSW2 395 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 TEX13BQ9BXU2 312 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 GSDMCQ9BYG8 508 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 TMEM117Q9H0C3 514 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 FARSBQ9NSD9 589 aaKnown RBP4.61□□□□□ -1.67
VPS50-212ENST00000476413 HCFC1P51610 2035 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 ATP10DQ9P241 1426 aa4.61□□□□□ -1.67
VPS50-212ENST00000476413 PPIAL4CA0A0B4J2A2 164 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 FAM74A7A6NL05 159 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 TBX19O60806 448 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 TM7SF2O76062 418 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 B3GAT3O94766 335 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 PRAMEF12O95522 483 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 ANP32DO95626 131 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 IGF1P05019 195 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 PPIAL4GP0DN37 164 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 UMPSP11172 480 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 CPN1P15169 458 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 NT5EP21589 574 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 IDSP22304 550 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 ALDH3B2P48448 385 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 ARHGDIBP52566 201 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 CRMP1Q14194 572 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 MICAQ29983 383 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 FAM74A3Q4VXF1 159 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 LCE1FQ5T754 118 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 ZNF57Q68EA5 555 aaPredicted RBP4.6□□□□□ -1.67
VPS50-212ENST00000476413 PYHIN1Q6K0P9 492 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 DPY19L4Q7Z388 723 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 AKR1E2Q96JD6 320 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 PSMB7Q99436 277 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 TM2D1Q9BX74 207 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 HCAR1Q9BXC0 346 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 POLR3FQ9H1D9 316 aaPredicted RBP4.6□□□□□ -1.67
VPS50-212ENST00000476413 POLD4Q9HCU8 107 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 ELOVL2Q9NXB9 296 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 AATFQ9NY61 560 aaKnown RBP eCLIP4.6□□□□□ -1.67
VPS50-212ENST00000476413 CYTH4Q9UIA0 394 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 ANAPC7Q9UJX3 599 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 SMC3Q9UQE7 1217 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 GSTK1Q9Y2Q3 226 aa4.6□□□□□ -1.67
VPS50-212ENST00000476413 CCT8L1PA6NM43 557 aa4.59□□□□□ -1.67
VPS50-212ENST00000476413 PPIAL4DF5H284 164 aa4.59□□□□□ -1.67
VPS50-212ENST00000476413 ZSCAN12O43309 604 aa4.59□□□□□ -1.67
VPS50-212ENST00000476413 OR1F1O43749 312 aa4.59□□□□□ -1.67
VPS50-212ENST00000476413 SRPX2O60687 465 aaPredicted RBP4.59□□□□□ -1.67
VPS50-212ENST00000476413 ZNF354AO60765 605 aaPredicted RBP4.59□□□□□ -1.67
VPS50-212ENST00000476413 STX11O75558 287 aa4.59□□□□□ -1.67
VPS50-212ENST00000476413 PIGRP01833 764 aa4.59□□□□□ -1.67
VPS50-212ENST00000476413 CT45A10P0DMU9 189 aa4.59□□□□□ -1.67
VPS50-212ENST00000476413 LAMP1P11279 417 aa4.59□□□□□ -1.67
VPS50-212ENST00000476413 BCKDHAP12694 445 aa4.59□□□□□ -1.67
VPS50-212ENST00000476413 GATA1P15976 413 aaPredicted RBP4.59□□□□□ -1.67
VPS50-212ENST00000476413 PSMA5P28066 241 aa4.59□□□□□ -1.67
VPS50-212ENST00000476413 KDRP35968 1356 aa4.59□□□□□ -1.67
VPS50-212ENST00000476413 IFNAR2P48551 515 aa4.59□□□□□ -1.67
VPS50-212ENST00000476413 EMDP50402 254 aa4.59□□□□□ -1.67
VPS50-212ENST00000476413 HMGCS2P54868 508 aa4.59□□□□□ -1.67
VPS50-212ENST00000476413 ERVPABLB-1P60509 514 aa4.59□□□□□ -1.67
VPS50-212ENST00000476413 NUCB2P80303 420 aa4.59□□□□□ -1.67
VPS50-212ENST00000476413 IL18R1Q13478 541 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms