RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 MTDHQ86UE4 582 aaKnown RBP27.06■■□□□ 1.92
HOXB3-208ENST00000476342 DPP10Q8N608 796 aa27.06■■□□□ 1.92
HOXB3-208ENST00000476342 CHDHQ8NE62 594 aaPredicted RBP27.06■■□□□ 1.92
HOXB3-208ENST00000476342 AURKBQ96GD4 344 aaPredicted RBP27.06■■□□□ 1.92
HOXB3-208ENST00000476342 GALNT9Q9HCQ5 603 aa27.06■■□□□ 1.92
HOXB3-208ENST00000476342 B4GALT7Q9UBV7 327 aa27.06■■□□□ 1.92
HOXB3-208ENST00000476342 WIF1Q9Y5W5 379 aa27.06■■□□□ 1.92
HOXB3-208ENST00000476342 SVILO95425 2214 aa27.05■■□□□ 1.92
HOXB3-208ENST00000476342 BBIP1A8MTZ0 92 aa27.05■■□□□ 1.92
HOXB3-208ENST00000476342 CLIC1O00299 241 aa27.05■■□□□ 1.92
HOXB3-208ENST00000476342 SHOX2O60902 331 aaPredicted RBP27.05■■□□□ 1.92
HOXB3-208ENST00000476342 HOXB9P17482 250 aaPredicted RBP27.05■■□□□ 1.92
HOXB3-208ENST00000476342 PPIBP23284 216 aaKnown RBP27.05■■□□□ 1.92
HOXB3-208ENST00000476342 ELAVL4P26378 380 aaKnown RBP27.05■■□□□ 1.92
HOXB3-208ENST00000476342 HYAL4Q2M3T9 481 aa27.05■■□□□ 1.92
HOXB3-208ENST00000476342 ARHGAP11BQ3KRB8 267 aa27.05■■□□□ 1.92
HOXB3-208ENST00000476342 MMEL1Q495T6 779 aa27.05■■□□□ 1.92
HOXB3-208ENST00000476342 DHDDSQ86SQ9 333 aa27.05■■□□□ 1.92
HOXB3-208ENST00000476342 OR52N2Q8NGI0 321 aa27.05■■□□□ 1.92
HOXB3-208ENST00000476342 RAB8BQ92930 207 aa27.05■■□□□ 1.92
HOXB3-208ENST00000476342 SLAMF8Q9P0V8 285 aa27.05■■□□□ 1.92
HOXB3-208ENST00000476342 HMGN4O00479 90 aa27.04■■□□□ 1.92
HOXB3-208ENST00000476342 FADS1O60427 444 aa27.04■■□□□ 1.92
HOXB3-208ENST00000476342 GLSO94925 669 aaPredicted RBP27.04■■□□□ 1.92
HOXB3-208ENST00000476342 C1QCP02747 245 aa27.04■■□□□ 1.92
HOXB3-208ENST00000476342 EDN3P14138 238 aa27.04■■□□□ 1.92
HOXB3-208ENST00000476342 HPGDP15428 266 aa27.04■■□□□ 1.92
HOXB3-208ENST00000476342 CRATP43155 626 aa27.04■■□□□ 1.92
HOXB3-208ENST00000476342 PPIAP62937 165 aaKnown RBP27.04■■□□□ 1.92
HOXB3-208ENST00000476342 GRAMD1BQ3KR37 738 aa27.04■■□□□ 1.92
HOXB3-208ENST00000476342 COQ5Q5HYK3 327 aa27.04■■□□□ 1.92
HOXB3-208ENST00000476342 RNFT1Q5M7Z0 435 aa27.04■■□□□ 1.92
HOXB3-208ENST00000476342 COX20Q5RI15 118 aa27.04■■□□□ 1.92
HOXB3-208ENST00000476342 DDX59Q5T1V6 619 aaKnown RBP eCLIP27.04■■□□□ 1.92
HOXB3-208ENST00000476342 HEPHL1Q6MZM0 1159 aa27.04■■□□□ 1.92
HOXB3-208ENST00000476342 BNC2Q6ZN30 1099 aaPredicted RBP27.04■■□□□ 1.92
HOXB3-208ENST00000476342 NTNG2Q96CW9 530 aa27.04■■□□□ 1.92
HOXB3-208ENST00000476342 CCT8L2Q96SF2 557 aa27.04■■□□□ 1.92
HOXB3-208ENST00000476342 SDF2Q99470 211 aa27.04■■□□□ 1.92
HOXB3-208ENST00000476342 TBL1XR1Q9BZK7 514 aa27.04■■□□□ 1.92
HOXB3-208ENST00000476342 UBQLN4Q9NRR5 601 aa27.04■■□□□ 1.92
HOXB3-208ENST00000476342 FBXO34Q9NWN3 711 aa27.04■■□□□ 1.92
HOXB3-208ENST00000476342 THUMPD1Q9NXG2 353 aaKnown RBP27.04■■□□□ 1.92
HOXB3-208ENST00000476342 SLC25A37Q9NYZ2 338 aa27.04■■□□□ 1.92
HOXB3-208ENST00000476342 VAPAQ9P0L0 249 aa27.04■■□□□ 1.92
HOXB3-208ENST00000476342 ARL2BPQ9Y2Y0 163 aa27.04■■□□□ 1.92
HOXB3-208ENST00000476342 FAM166BA8MTA8 275 aa27.03■■□□□ 1.92
HOXB3-208ENST00000476342 NGFRP08138 427 aa27.03■■□□□ 1.92
HOXB3-208ENST00000476342 MST1P26927 711 aa27.03■■□□□ 1.92
HOXB3-208ENST00000476342 HPCAP84074 193 aa27.03■■□□□ 1.92
HOXB3-208ENST00000476342 FADDQ13158 208 aa27.03■■□□□ 1.92
HOXB3-208ENST00000476342 NFYCQ13952 458 aa27.03■■□□□ 1.92
HOXB3-208ENST00000476342 ZAR1Q86SH2 424 aa27.03■■□□□ 1.92
HOXB3-208ENST00000476342 RETREG3Q86VR2 466 aa27.03■■□□□ 1.92
HOXB3-208ENST00000476342 ATCAYQ86WG3 371 aa27.03■■□□□ 1.92
HOXB3-208ENST00000476342 SNX32Q86XE0 403 aa27.03■■□□□ 1.92
HOXB3-208ENST00000476342 OR1J4Q8NGS1 313 aa27.03■■□□□ 1.92
HOXB3-208ENST00000476342 HOXD1Q9GZZ0 328 aa27.03■■□□□ 1.92
HOXB3-208ENST00000476342 TSPAN10Q9H1Z9 355 aaPredicted RBP27.03■■□□□ 1.92
HOXB3-208ENST00000476342 SDHAF3Q9NRP4 125 aa27.03■■□□□ 1.92
HOXB3-208ENST00000476342 FLRT3Q9NZU0 649 aa27.03■■□□□ 1.92
HOXB3-208ENST00000476342 NIPSNAP3AQ9UFN0 247 aaPredicted RBP27.03■■□□□ 1.92
HOXB3-208ENST00000476342 CORO2BQ9UQ03 480 aa27.03■■□□□ 1.92
HOXB3-208ENST00000476342 LIPT1Q9Y234 373 aa27.03■■□□□ 1.92
HOXB3-208ENST00000476342 RP1L1Q8IWN7 2480 aaPredicted RBP27.02■■□□□ 1.92
HOXB3-208ENST00000476342 NBASA2RRP1 2371 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 LRRC3CA6NJW4 275 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 NPIPA5E9PKD4 350 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 SNPHO15079 494 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 SCO2O43819 266 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 STX11O75558 287 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 UNC5CO95185 931 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 OXSR1O95747 527 aaPredicted RBP27.02■■□□□ 1.92
HOXB3-208ENST00000476342 FAM107AO95990 144 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 TBXA2RP21731 343 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 TDGF1P3P51864 188 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 MVDP53602 400 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 FOXK1P85037 733 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 STX5Q13190 355 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 CYLC2Q14093 348 aaPredicted RBP27.02■■□□□ 1.92
HOXB3-208ENST00000476342 FLYWCH1Q4VC44 716 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 KRTCAP3Q53RY4 240 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 DLEU7Q6UYE1 221 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 SIAH3Q8IW03 269 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 MSRB3Q8IXL7 192 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 FAM109AQ8N4B1 249 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 ZNF527Q8NB42 609 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 NPIPA1Q9UND3 350 aa27.02■■□□□ 1.92
HOXB3-208ENST00000476342 TRBV5-3A0A0A0MS03 114 aa27.01■■□□□ 1.91
HOXB3-208ENST00000476342 SCDO00767 359 aa27.01■■□□□ 1.91
HOXB3-208ENST00000476342 GNB5O14775 395 aa27.01■■□□□ 1.91
HOXB3-208ENST00000476342 TIGD3Q6B0B8 471 aa27.01■■□□□ 1.91
HOXB3-208ENST00000476342 TMEM251Q8N6I4 163 aa27.01■■□□□ 1.91
HOXB3-208ENST00000476342 GALNT11Q8NCW6 608 aa27.01■■□□□ 1.91
HOXB3-208ENST00000476342 ST6GALNAC3Q8NDV1 305 aa27.01■■□□□ 1.91
HOXB3-208ENST00000476342 OR4C3Q8NH37 302 aa27.01■■□□□ 1.91
HOXB3-208ENST00000476342 RP9Q8TA86 221 aaKnown RBP27.01■■□□□ 1.91
HOXB3-208ENST00000476342 ROPN1LQ96C74 230 aa27.01■■□□□ 1.91
HOXB3-208ENST00000476342 GPR137Q96N19 417 aa27.01■■□□□ 1.91
HOXB3-208ENST00000476342 CCDC106Q9BWC9 280 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms