RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 C6orf47O95873 294 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 COX6B1P14854 86 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 DDX5P17844 614 aaKnown RBP19.23■□□□□ 0.67
LIME1-204ENST00000476183 SRD5A2P31213 254 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 PTGER4P35408 488 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 WNT3P56703 355 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 CLDN8P56748 225 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 C21orf58P58505 322 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 MAD2L1Q13257 205 aaPredicted RBP19.23■□□□□ 0.67
LIME1-204ENST00000476183 DUSP5Q16690 384 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 APOOLQ6UXV4 268 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 LIX1LQ8IVB5 337 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 MCEMP1Q8IX19 187 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 FADS6Q8N9I5 356 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 ACBD4Q8NC06 268 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 OR14L1PQ8NHC6 308 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 PSMA8Q8TAA3 256 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 OR5P2Q8WZ92 322 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 CXorf36Q9H7Y0 433 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 ZCCHC3Q9NUD5 404 aaKnown RBP19.23■□□□□ 0.67
LIME1-204ENST00000476183 ATAD3AQ9NVI7 634 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 FAM120CQ9NX05 1096 aaKnown RBP19.23■□□□□ 0.67
LIME1-204ENST00000476183 TAS2R10Q9NYW0 307 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 MRTO4Q9UKD2 239 aaKnown RBP19.23■□□□□ 0.67
LIME1-204ENST00000476183 ABCG2Q9UNQ0 655 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 CAMK2AQ9UQM7 478 aa19.23■□□□□ 0.67
LIME1-204ENST00000476183 ZIC3O60481 467 aa19.22■□□□□ 0.67
LIME1-204ENST00000476183 KCNH1O95259 989 aa19.22■□□□□ 0.67
LIME1-204ENST00000476183 ZFP36L2P47974 494 aaKnown RBP19.22■□□□□ 0.67
LIME1-204ENST00000476183 SLC18A1P54219 525 aa19.22■□□□□ 0.67
LIME1-204ENST00000476183 GFRA1P56159 465 aa19.22■□□□□ 0.67
LIME1-204ENST00000476183 PRR5P85299 388 aa19.22■□□□□ 0.67
LIME1-204ENST00000476183 STX5Q13190 355 aa19.22■□□□□ 0.67
LIME1-204ENST00000476183 CASP8Q14790 479 aa19.22■□□□□ 0.67
LIME1-204ENST00000476183 GRAMD1BQ3KR37 738 aa19.22■□□□□ 0.67
LIME1-204ENST00000476183 VPS26BQ4G0F5 336 aa19.22■□□□□ 0.67
LIME1-204ENST00000476183 RIPPLY2Q5TAB7 128 aa19.22■□□□□ 0.67
LIME1-204ENST00000476183 ZAR1Q86SH2 424 aa19.22■□□□□ 0.67
LIME1-204ENST00000476183 MARCH3Q86UD3 253 aa19.22■□□□□ 0.67
LIME1-204ENST00000476183 PM20D2Q8IYS1 436 aa19.22■□□□□ 0.67
LIME1-204ENST00000476183 FAM110BQ8TC76 370 aa19.22■□□□□ 0.67
LIME1-204ENST00000476183 DUSP26Q9BV47 211 aa19.22■□□□□ 0.67
LIME1-204ENST00000476183 BHLHE41Q9C0J9 482 aaPredicted RBP19.22■□□□□ 0.67
LIME1-204ENST00000476183 DSN1Q9H410 356 aa19.22■□□□□ 0.67
LIME1-204ENST00000476183 NPDC1Q9NQX5 325 aaPredicted RBP19.22■□□□□ 0.67
LIME1-204ENST00000476183 FBXO34Q9NWN3 711 aa19.22■□□□□ 0.67
LIME1-204ENST00000476183 PPP4R1LQ9P1A2 415 aa19.22■□□□□ 0.67
LIME1-204ENST00000476183 SNX8Q9Y5X2 465 aa19.22■□□□□ 0.67
LIME1-204ENST00000476183 SNNO75324 88 aaPredicted RBP19.21■□□□□ 0.67
LIME1-204ENST00000476183 EPPINO95925 133 aa19.21■□□□□ 0.67
LIME1-204ENST00000476183 ACTL6AO96019 429 aa19.21■□□□□ 0.67
LIME1-204ENST00000476183 HMGN2P05204 90 aaKnown RBP19.21■□□□□ 0.67
LIME1-204ENST00000476183 TCEA1P23193 301 aaKnown RBP19.21■□□□□ 0.67
LIME1-204ENST00000476183 DPP4P27487 766 aa19.21■□□□□ 0.67
LIME1-204ENST00000476183 PSMD4P55036 377 aaKnown RBP19.21■□□□□ 0.67
LIME1-204ENST00000476183 LASP1Q14847 261 aaKnown RBP19.21■□□□□ 0.67
LIME1-204ENST00000476183 ZCCHC12Q6PEW1 402 aa19.21■□□□□ 0.67
LIME1-204ENST00000476183 FIGNL1Q6PIW4 674 aa19.21■□□□□ 0.67
LIME1-204ENST00000476183 CAMKMTQ7Z624 323 aa19.21■□□□□ 0.67
LIME1-204ENST00000476183 TRIM42Q8IWZ5 723 aa19.21■□□□□ 0.67
LIME1-204ENST00000476183 NAXEQ8NCW5 288 aa19.21■□□□□ 0.67
LIME1-204ENST00000476183 OR2M3Q8NG83 312 aa19.21■□□□□ 0.67
LIME1-204ENST00000476183 OR4K17Q8NGC6 315 aa19.21■□□□□ 0.67
LIME1-204ENST00000476183 PRPF18Q99633 342 aaKnown RBP19.21■□□□□ 0.67
LIME1-204ENST00000476183 ENKD1Q9H0I2 346 aa19.21■□□□□ 0.67
LIME1-204ENST00000476183 MEAF6Q9HAF1 191 aa19.21■□□□□ 0.67
LIME1-204ENST00000476183 KCNJ16Q9NPI9 418 aa19.21■□□□□ 0.67
LIME1-204ENST00000476183 MED11Q9P086 117 aa19.21■□□□□ 0.67
LIME1-204ENST00000476183 DKKL1Q9UK85 242 aa19.21■□□□□ 0.67
LIME1-204ENST00000476183 MRPS18CQ9Y3D5 142 aaKnown RBP19.21■□□□□ 0.67
LIME1-204ENST00000476183 TACC2O95359 2948 aa19.21■□□□□ 0.67
LIME1-204ENST00000476183 KCNK2O95069 426 aa19.2■□□□□ 0.66
LIME1-204ENST00000476183 ALOX5P09917 674 aa19.2■□□□□ 0.66
LIME1-204ENST00000476183 CCT3P49368 545 aaKnown RBP19.2■□□□□ 0.66
LIME1-204ENST00000476183 STARP49675 285 aa19.2■□□□□ 0.66
LIME1-204ENST00000476183 PGS1Q32NB8 556 aa19.2■□□□□ 0.66
LIME1-204ENST00000476183 IFNEQ86WN2 208 aa19.2■□□□□ 0.66
LIME1-204ENST00000476183 KIRREL3Q8IZU9 778 aa19.2■□□□□ 0.66
LIME1-204ENST00000476183 ZNF295-AS1Q8N0V1 137 aa19.2■□□□□ 0.66
LIME1-204ENST00000476183 NATD1Q8N6N6 113 aa19.2■□□□□ 0.66
LIME1-204ENST00000476183 TNIP2Q8NFZ5 429 aa19.2■□□□□ 0.66
LIME1-204ENST00000476183 DUSP19Q8WTR2 217 aa19.2■□□□□ 0.66
LIME1-204ENST00000476183 JADE3Q92613 823 aa19.2■□□□□ 0.66
LIME1-204ENST00000476183 ARL8AQ96BM9 186 aa19.2■□□□□ 0.66
LIME1-204ENST00000476183 TREX2Q9BQ50 279 aaPredicted RBP19.2■□□□□ 0.66
LIME1-204ENST00000476183 TRIM8Q9BZR9 551 aa19.2■□□□□ 0.66
LIME1-204ENST00000476183 THAP1Q9NVV9 213 aa19.2■□□□□ 0.66
LIME1-204ENST00000476183 GPATCH2Q9NW75 528 aa19.2■□□□□ 0.66
LIME1-204ENST00000476183 RPH3AQ9Y2J0 694 aaPredicted RBP19.2■□□□□ 0.66
LIME1-204ENST00000476183 CREBBPQ92793 2442 aa19.2■□□□□ 0.66
LIME1-204ENST00000476183 DOCK7Q96N67 2140 aa19.19■□□□□ 0.66
LIME1-204ENST00000476183 SDHDO14521 159 aa19.19■□□□□ 0.66
LIME1-204ENST00000476183 ANKRD28O15084 1053 aa19.19■□□□□ 0.66
LIME1-204ENST00000476183 CPN1P15169 458 aa19.19■□□□□ 0.66
LIME1-204ENST00000476183 IGFBP2P18065 325 aa19.19■□□□□ 0.66
LIME1-204ENST00000476183 CEACAM8P31997 349 aaPredicted RBP19.19■□□□□ 0.66
LIME1-204ENST00000476183 PRIM2P49643 509 aa19.19■□□□□ 0.66
LIME1-204ENST00000476183 LHX2P50458 406 aa19.19■□□□□ 0.66
LIME1-204ENST00000476183 DSCR4P56555 118 aaPredicted RBP19.19■□□□□ 0.66
LIME1-204ENST00000476183 B3GALT5-AS1P59052 145 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms