RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 TRIM64BA6NI03 449 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 STX16-NPEPL1H3BU86 382 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 STX16O14662 325 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 ARHGEF9O43307 516 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 SMPD2O60906 423 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 TSPAN8P19075 237 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 TCEA1P23193 301 aaKnown RBP9.4□□□□□ -0.9
CALD1-217ENST00000475772 PCSK6P29122 969 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 TYK2P29597 1187 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 DEKP35659 375 aaKnown RBP9.4□□□□□ -0.9
CALD1-217ENST00000475772 CD79BP40259 229 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 MAGEA12P43365 314 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 DIO3P55073 304 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 CDH13P55290 713 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 CORO7P57737 925 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 RAE1P78406 368 aaKnown RBP9.4□□□□□ -0.9
CALD1-217ENST00000475772 CAPRIN1Q14444 709 aaKnown RBP9.4□□□□□ -0.9
CALD1-217ENST00000475772 GUSBP1Q15486 140 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 BCL2A1Q16548 175 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 PRSS53Q2L4Q9 553 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 TTC19Q6DKK2 380 aaPredicted RBP9.4□□□□□ -0.9
CALD1-217ENST00000475772 LETMD1Q6P1Q0 360 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 PAGE2Q7Z2X7 111 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 ZNF550Q7Z398 422 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 CCDC91Q7Z6B0 441 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 MILR1Q7Z6M3 343 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 YTHDF3Q7Z739 585 aaKnown RBP9.4□□□□□ -0.9
CALD1-217ENST00000475772 GRAMD2AQ8IUY3 354 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 ZNF675Q8TD23 568 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 KAT2AQ92830 837 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 PIGTQ969N2 578 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 TMCO6Q96DC7 493 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 PIK3IP1Q96FE7 263 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 PGM2Q96G03 612 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 VSTM2LQ96N03 204 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 SFXN2Q96NB2 322 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 BTBD9Q96Q07 612 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 ADOQ96SZ5 270 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 LRRC1Q9BTT6 524 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 VPS11Q9H270 941 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 ACBD3Q9H3P7 528 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 PRODH2Q9UF12 536 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 SLC12A4Q9UP95 1085 aa9.4□□□□□ -0.9
CALD1-217ENST00000475772 EIF3LQ9Y262 564 aaKnown RBP9.4□□□□□ -0.9
CALD1-217ENST00000475772 CR1P17927 2039 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 GOLGA6L10A6NI86 522 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 FAM171A2A8MVW0 826 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 INAFM1C9JVW0 142 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 SMAD7O15105 426 aaKnown RBP9.39□□□□□ -0.91
CALD1-217ENST00000475772 CRHP06850 196 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 THBDP07204 575 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 RPS17P08708 135 aaKnown RBP9.39□□□□□ -0.91
CALD1-217ENST00000475772 CHN1P15882 459 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 RAB6AP20340 208 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 GRK2P25098 689 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 DPP4P27487 766 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 CPOXP36551 454 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 PNLIPRP2P54317 469 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 RPS26P62854 115 aaKnown RBP9.39□□□□□ -0.91
CALD1-217ENST00000475772 EEF1A1P68104 462 aaKnown RBP9.39□□□□□ -0.91
CALD1-217ENST00000475772 IFT88Q13099 833 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 TCHHL1Q5QJ38 904 aaPredicted RBP9.39□□□□□ -0.91
CALD1-217ENST00000475772 C6orf163Q5TEZ5 329 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 EEF1A1P5Q5VTE0 462 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 AAGABQ6PD74 315 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 SEZ6L2Q6UXD5 910 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 C1orf52Q8N6N3 182 aaKnown RBP9.39□□□□□ -0.91
CALD1-217ENST00000475772 FADS6Q8N9I5 356 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 ZNF610Q8N9Z0 462 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 OR2M3Q8NG83 312 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 ZNF483Q8TF39 744 aaPredicted RBP9.39□□□□□ -0.91
CALD1-217ENST00000475772 SELENOMQ8WWX9 145 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 KLHL29Q96CT2 875 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 HBEGFQ99075 208 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 DSN1Q9H410 356 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 BRF2Q9HAW0 419 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 FLRT3Q9NZU0 649 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 PYCARDQ9ULZ3 195 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 ZNF337Q9Y3M9 751 aa9.39□□□□□ -0.91
CALD1-217ENST00000475772 NUP214P35658 2090 aaPredicted RBP9.39□□□□□ -0.91
CALD1-217ENST00000475772 YLPM1P49750 1951 aaKnown RBP9.38□□□□□ -0.91
CALD1-217ENST00000475772 KLF4O43474 513 aa9.38□□□□□ -0.91
CALD1-217ENST00000475772 FADS1O60427 444 aa9.38□□□□□ -0.91
CALD1-217ENST00000475772 GUCY1B2O75343 617 aa9.38□□□□□ -0.91
CALD1-217ENST00000475772 OR4F21O95013 312 aa9.38□□□□□ -0.91
CALD1-217ENST00000475772 RBP1P09455 135 aa9.38□□□□□ -0.91
CALD1-217ENST00000475772 PEPDP12955 493 aa9.38□□□□□ -0.91
CALD1-217ENST00000475772 GCKP35557 465 aa9.38□□□□□ -0.91
CALD1-217ENST00000475772 UGT2B10P36537 528 aa9.38□□□□□ -0.91
CALD1-217ENST00000475772 ARL1P40616 181 aaPredicted RBP9.38□□□□□ -0.91
CALD1-217ENST00000475772 ALDH9A1P49189 494 aa9.38□□□□□ -0.91
CALD1-217ENST00000475772 DSCR4P56555 118 aaPredicted RBP9.38□□□□□ -0.91
CALD1-217ENST00000475772 TRA2BP62995 288 aaKnown RBP9.38□□□□□ -0.91
CALD1-217ENST00000475772 PSG6Q00889 435 aa9.38□□□□□ -0.91
CALD1-217ENST00000475772 CAV1Q03135 178 aa9.38□□□□□ -0.91
CALD1-217ENST00000475772 C10orf62Q5T681 223 aaPredicted RBP9.38□□□□□ -0.91
CALD1-217ENST00000475772 KLC3Q6P597 504 aa9.38□□□□□ -0.91
CALD1-217ENST00000475772 TAOK1Q7L7X3 1001 aa9.38□□□□□ -0.91
CALD1-217ENST00000475772 ZDHHC13Q8IUH4 622 aa9.38□□□□□ -0.91
CALD1-217ENST00000475772 CNEP1R1Q8N9A8 125 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms