RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 MGAT4BQ9UQ53 548 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 MRPS7Q9Y2R9 242 aaKnown RBP4.5□□□□□ -1.69
SMC5-203ENST00000475540 HDAC3O15379 428 aa4.49□□□□□ -1.69
SMC5-203ENST00000475540 PDE5AO76074 875 aa4.49□□□□□ -1.69
SMC5-203ENST00000475540 RHOBTB1O94844 696 aa4.49□□□□□ -1.69
SMC5-203ENST00000475540 CALCBP10092 127 aa4.49□□□□□ -1.69
SMC5-203ENST00000475540 HNRNPA2B1P22626 353 aaKnown RBP4.49□□□□□ -1.69
SMC5-203ENST00000475540 CYP2F1P24903 491 aa4.49□□□□□ -1.69
SMC5-203ENST00000475540 GABPB1Q06547 395 aaPredicted RBP4.49□□□□□ -1.69
SMC5-203ENST00000475540 CD47Q08722 323 aa4.49□□□□□ -1.69
SMC5-203ENST00000475540 GPAT3Q53EU6 434 aa4.49□□□□□ -1.69
SMC5-203ENST00000475540 BOLA3Q53S33 107 aa4.49□□□□□ -1.69
SMC5-203ENST00000475540 CFAP157Q5JU67 520 aa4.49□□□□□ -1.69
SMC5-203ENST00000475540 C9orf129Q5T035 196 aaKnown RBP4.49□□□□□ -1.69
SMC5-203ENST00000475540 SEL1L2Q5TEA6 688 aa4.49□□□□□ -1.69
SMC5-203ENST00000475540 HIST2H2AA3Q6FI13 130 aa4.49□□□□□ -1.69
SMC5-203ENST00000475540 ERICH1Q86X53 443 aa4.49□□□□□ -1.69
SMC5-203ENST00000475540 OR52B4Q8NGK2 314 aa4.49□□□□□ -1.69
SMC5-203ENST00000475540 FCGR1BQ92637 280 aa4.49□□□□□ -1.69
SMC5-203ENST00000475540 RMND5AQ9H871 391 aa4.49□□□□□ -1.69
SMC5-203ENST00000475540 VAT1LQ9HCJ6 419 aa4.49□□□□□ -1.69
SMC5-203ENST00000475540 PRO0461Q9UI25 63 aa4.49□□□□□ -1.69
SMC5-203ENST00000475540 RNF115Q9Y4L5 304 aa4.49□□□□□ -1.69
SMC5-203ENST00000475540 MAGEB3O15480 346 aa4.48□□□□□ -1.69
SMC5-203ENST00000475540 NME2P1O60361 137 aa4.48□□□□□ -1.69
SMC5-203ENST00000475540 APRTP07741 180 aa4.48□□□□□ -1.69
SMC5-203ENST00000475540 HIST1H2AGP0C0S8 130 aaPredicted RBP4.48□□□□□ -1.69
SMC5-203ENST00000475540 RALAP11233 206 aa4.48□□□□□ -1.69
SMC5-203ENST00000475540 OTX2P32243 289 aa4.48□□□□□ -1.69
SMC5-203ENST00000475540 SPIBQ01892 262 aa4.48□□□□□ -1.69
SMC5-203ENST00000475540 CAPRIN1Q14444 709 aaKnown RBP4.48□□□□□ -1.69
SMC5-203ENST00000475540 PDIA5Q14554 519 aa4.48□□□□□ -1.69
SMC5-203ENST00000475540 NADK2Q4G0N4 442 aa4.48□□□□□ -1.69
SMC5-203ENST00000475540 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.48□□□□□ -1.69
SMC5-203ENST00000475540 APOBEC3FQ8IUX4 373 aaKnown RBP4.48□□□□□ -1.69
SMC5-203ENST00000475540 FBXO16Q8IX29 292 aaPredicted RBP4.48□□□□□ -1.69
SMC5-203ENST00000475540 GPR137CQ8N3F9 429 aa4.48□□□□□ -1.69
SMC5-203ENST00000475540 OR52K2Q8NGK3 314 aa4.48□□□□□ -1.69
SMC5-203ENST00000475540 OR10T2Q8NGX3 314 aa4.48□□□□□ -1.69
SMC5-203ENST00000475540 DQX1Q8TE96 717 aaKnown RBP4.48□□□□□ -1.69
SMC5-203ENST00000475540 HIST1H2ACQ93077 130 aa4.48□□□□□ -1.69
SMC5-203ENST00000475540 NUS1Q96E22 293 aa4.48□□□□□ -1.69
SMC5-203ENST00000475540 GPR137Q96N19 417 aa4.48□□□□□ -1.69
SMC5-203ENST00000475540 RAB33BQ9H082 229 aa4.48□□□□□ -1.69
SMC5-203ENST00000475540 IKZF5Q9H5V7 419 aa4.48□□□□□ -1.69
SMC5-203ENST00000475540 GORASP2Q9H8Y8 452 aa4.48□□□□□ -1.69
SMC5-203ENST00000475540 LRRC40Q9H9A6 602 aa4.48□□□□□ -1.69
SMC5-203ENST00000475540 ENTPD4Q9Y227 616 aa4.48□□□□□ -1.69
SMC5-203ENST00000475540 MFHAS1Q9Y4C4 1052 aa4.48□□□□□ -1.69
SMC5-203ENST00000475540 IGKV6D-21A0A0A0MT36 114 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 FRG2CA6NGY1 282 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 G3V3Y1 287 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 SGK1O00141 431 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 MAPK13O15264 365 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 CHADO15335 359 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 CFLARO15519 480 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 NUDT21O43809 227 aaKnown RBP4.47□□□□□ -1.69
SMC5-203ENST00000475540 MFN2O95140 757 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 GSTA1P08263 222 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 EPB41P11171 864 aaKnown RBP4.47□□□□□ -1.69
SMC5-203ENST00000475540 TOP1P11387 765 aaKnown RBP4.47□□□□□ -1.69
SMC5-203ENST00000475540 TNNI3P19429 210 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 SNTB2Q13425 540 aaKnown RBP4.47□□□□□ -1.69
SMC5-203ENST00000475540 TPD52L1Q16890 204 aaPredicted RBP4.47□□□□□ -1.69
SMC5-203ENST00000475540 QRICH1Q2TAL8 776 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 LDLRAP1Q5SW96 308 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 ZNF658Q5TYW1 1059 aaPredicted RBP4.47□□□□□ -1.69
SMC5-203ENST00000475540 NKAIN2Q5VXU1 208 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 TMEM26Q6ZUK4 368 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 MISPQ8IVT2 679 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 PYROXD2Q8N2H3 581 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 ZCCHC7Q8N3Z6 543 aaKnown RBP4.47□□□□□ -1.69
SMC5-203ENST00000475540 FAM133AQ8N9E0 248 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 OR2T34Q8NGX1 318 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 LINC00167Q96N53 147 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 SIRPDQ9H106 197 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 TM9SF3Q9HD45 589 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 DPM3Q9P2X0 92 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 ATXN10Q9UBB4 475 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 NARFQ9UHQ1 456 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 NTNG1Q9Y2I2 539 aa4.47□□□□□ -1.69
SMC5-203ENST00000475540 LCMT2O60294 686 aaKnown RBP4.46□□□□□ -1.7
SMC5-203ENST00000475540 MTX2O75431 263 aa4.46□□□□□ -1.7
SMC5-203ENST00000475540 VPS26AO75436 327 aa4.46□□□□□ -1.7
SMC5-203ENST00000475540 PRDX6P30041 224 aa4.46□□□□□ -1.7
SMC5-203ENST00000475540 XCR1P46094 333 aa4.46□□□□□ -1.7
SMC5-203ENST00000475540 P2RY4P51582 365 aa4.46□□□□□ -1.7
SMC5-203ENST00000475540 HSF2Q03933 536 aa4.46□□□□□ -1.7
SMC5-203ENST00000475540 IL24Q13007 206 aa4.46□□□□□ -1.7
SMC5-203ENST00000475540 SNX1Q13596 522 aa4.46□□□□□ -1.7
SMC5-203ENST00000475540 SLC36A3Q495N2 470 aa4.46□□□□□ -1.7
SMC5-203ENST00000475540 FILIP1LQ4L180 1135 aa4.46□□□□□ -1.7
SMC5-203ENST00000475540 C2orf83Q53S99 150 aa4.46□□□□□ -1.7
SMC5-203ENST00000475540 TMEM41BQ5BJD5 291 aa4.46□□□□□ -1.7
SMC5-203ENST00000475540 SLC22A10Q63ZE4 541 aa4.46□□□□□ -1.7
SMC5-203ENST00000475540 SULT1C3Q6IMI6 304 aa4.46□□□□□ -1.7
SMC5-203ENST00000475540 CES3Q6UWW8 571 aa4.46□□□□□ -1.7
SMC5-203ENST00000475540 ADAMTSL5Q6ZMM2 481 aa4.46□□□□□ -1.7
SMC5-203ENST00000475540 PRSS48Q7RTY5 328 aa4.46□□□□□ -1.7
SMC5-203ENST00000475540 CENPLQ8N0S6 344 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms