RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 EIF3IQ13347 325 aaKnown RBP12.72□□□□□ -0.37
TRAF4-210ENST00000475329 TRIP6Q15654 476 aaKnown RBP12.72□□□□□ -0.37
TRAF4-210ENST00000475329 NNATQ16517 81 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 NHSL2Q5HYW2 709 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 RNF220Q5VTB9 566 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 HLA-DQA1Q5Y7H0 255 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 AP1ARQ63HQ0 302 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 SLC29A4Q7RTT9 530 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 LACC1Q8IV20 430 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 TAGAPQ8N103 731 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 BCORP1Q8N888 145 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 GALNT6Q8NCL4 622 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 OR4C15Q8NGM1 316 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 OR1N1Q8NGS0 311 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 NR4A3Q92570 626 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 ZG16BQ96DA0 208 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 TAAR9Q96RI9 348 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 ADI1Q9BV57 179 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 ARMC7Q9H6L4 198 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 SMURF2Q9HAU4 748 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 PDP1Q9P0J1 537 aaPredicted RBP12.72□□□□□ -0.37
TRAF4-210ENST00000475329 PISDQ9UG56 409 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 CBLCQ9ULV8 474 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 PCDHGA10Q9Y5H3 936 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 B3GALT1Q9Y5Z6 326 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 NPIPA5A0A0B4J1W7 369 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 NPIPA7E9PJI5 369 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 PEX12O00623 359 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 UGT2B17O75795 530 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 STK17BO94768 372 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 IGKV1D-16P01601 117 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 RPSAP08865 295 aaKnown RBP12.71□□□□□ -0.37
TRAF4-210ENST00000475329 NPIPA8P0DM63 369 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 NID1P14543 1247 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 DRD5P21918 477 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 PRKACGP22612 351 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 IGFBP5P24593 272 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 RAD23AP54725 363 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 CLDN6P56747 220 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 RGS8P57771 180 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-210ENST00000475329 FOXL2P58012 376 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 EPS8Q12929 822 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 GANABQ14697 944 aaKnown RBP12.71□□□□□ -0.37
TRAF4-210ENST00000475329 LAPTM4AQ15012 233 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 EBPQ15125 230 aaKnown RBP12.71□□□□□ -0.37
TRAF4-210ENST00000475329 DECR1Q16698 335 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.71□□□□□ -0.37
TRAF4-210ENST00000475329 EXOC3L2Q2M3D2 409 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 RFX4Q33E94 735 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 COLEC12Q5KU26 742 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 HES3Q5TGS1 186 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 TCTN3Q6NUS6 607 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 DHRS13Q6UX07 377 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 ZAR1Q86SH2 424 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 RBM45Q8IUH3 476 aaKnown RBP12.71□□□□□ -0.37
TRAF4-210ENST00000475329 MARVELD2Q8N4S9 558 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 DHRSXQ8N5I4 330 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 OR4N2Q8NGD1 307 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 OR6T1Q8NGN1 323 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 GIPC3Q8TF64 312 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 PHF10Q8WUB8 498 aaKnown RBP12.71□□□□□ -0.37
TRAF4-210ENST00000475329 CYGBQ8WWM9 190 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 LCORQ96JN0 433 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-210ENST00000475329 DHRS1Q96LJ7 313 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 PRRC1Q96M27 445 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 NR1H4Q96RI1 486 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-210ENST00000475329 GAL3ST4Q96RP7 486 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 BARD1Q99728 777 aaKnown RBP12.71□□□□□ -0.37
TRAF4-210ENST00000475329 EVA1AQ9H8M9 152 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 ACER3Q9NUN7 267 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 ACAD8Q9UKU7 415 aa12.71□□□□□ -0.37
TRAF4-210ENST00000475329 PCNX2A6NKB5 2137 aa12.71□□□□□ -0.38
TRAF4-210ENST00000475329 PIEZO1Q92508 2521 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 IGHV3-20A0A0C4DH32 117 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 CENPVL1A0A0U1RR11 272 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 C2orf92A0A1B0GVN3 265 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 FFAR1O14842 300 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 PLD2O14939 933 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 GFRA3O60609 400 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 SNAP29O95721 258 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 H1F0P07305 194 aaKnown RBP12.7□□□□□ -0.38
TRAF4-210ENST00000475329 CAPGP40121 348 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 LIMS1P48059 325 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 HMGA2P52926 109 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 MERTKQ12866 999 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 NCF4Q15080 339 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 NPTX1Q15818 432 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 MAPK14Q16539 360 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 FGD3Q5JSP0 725 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 MRPL2Q5T653 305 aaKnown RBP12.7□□□□□ -0.38
TRAF4-210ENST00000475329 PAPD4Q6PIY7 484 aaKnown RBP12.7□□□□□ -0.38
TRAF4-210ENST00000475329 TMEM205Q6UW68 189 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 ZNF517Q6ZMY9 492 aaPredicted RBP12.7□□□□□ -0.38
TRAF4-210ENST00000475329 CPEB2Q7Z5Q1 589 aaKnown RBP12.7□□□□□ -0.38
TRAF4-210ENST00000475329 CHERPQ8IWX8 916 aaKnown RBP12.7□□□□□ -0.38
TRAF4-210ENST00000475329 C9orf40Q8IXQ3 194 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 CLIP4Q8N3C7 705 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 ATG16L2Q8NAA4 619 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 PIK3C3Q8NEB9 887 aa12.7□□□□□ -0.38
TRAF4-210ENST00000475329 DEFB124Q8NES8 71 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms