RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 RPL36Q9Y3U8 105 aaKnown RBP9.13□□□□□ -0.95
USP39-214ENST00000474572 TNRC6BQ9UPQ9 1833 aaKnown RBP9.12□□□□□ -0.95
USP39-214ENST00000474572 HYKKA2RU49 373 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 CDHR4A6H8M9 788 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 KDM4EB2RXH2 506 aaPredicted RBP9.12□□□□□ -0.95
USP39-214ENST00000474572 H0YIG0 161 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 H3BMH7 237 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 AQP9O43315 295 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 ZNF749O43361 778 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 PRKYO43930 277 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 CTNSO60931 367 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 CNOT3O75175 753 aaKnown RBP9.12□□□□□ -0.95
USP39-214ENST00000474572 PIAS2O75928 621 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 RPLP0P05388 317 aaKnown RBP9.12□□□□□ -0.95
USP39-214ENST00000474572 IL9P15248 144 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 ENDOUP21128 410 aaKnown RBP9.12□□□□□ -0.95
USP39-214ENST00000474572 CSTF2P33240 577 aaKnown RBP eCLIP9.12□□□□□ -0.95
USP39-214ENST00000474572 GRK5P34947 590 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 AVPR1BP47901 424 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 FNTBP49356 437 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 BMXP51813 675 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 NCS1P62166 190 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 PSG6Q00889 435 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 NR1D2Q14995 579 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 EXOSC7Q15024 291 aaKnown RBP9.12□□□□□ -0.95
USP39-214ENST00000474572 DGUOKQ16854 277 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 C14orf28Q4W4Y0 310 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 TCTE1Q5JU00 501 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 CCNJQ5T5M9 372 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 PTCRAQ6ISU1 281 aaPredicted RBP9.12□□□□□ -0.95
USP39-214ENST00000474572 SLC36A4Q6YBV0 504 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 ZNF730Q6ZMV8 503 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 RANBP3LQ86VV4 465 aaPredicted RBP9.12□□□□□ -0.95
USP39-214ENST00000474572 GALNT12Q8IXK2 581 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 RNF113BQ8IZP6 322 aaKnown RBP9.12□□□□□ -0.95
USP39-214ENST00000474572 TCEANCQ8N8B7 351 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 COX18Q8N8Q8 333 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 OR52R1Q8NGF1 315 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 TEX47Q8TBZ9 253 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 TMEM163Q8TC26 289 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 PIK3R3Q92569 461 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 RPL3LQ92901 407 aaKnown RBP9.12□□□□□ -0.95
USP39-214ENST00000474572 HLA-CQ95604 372 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 SLC35B4Q969S0 331 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 TMEM80Q96HE8 168 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 VSTM2LQ96N03 204 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 IL4I1Q96RQ9 567 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 SLC38A3Q99624 504 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 PRR14Q9BWN1 585 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 TSSK6Q9BXA6 273 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 PLA2G12AQ9BZM1 189 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 SLIRPQ9GZT3 109 aaKnown RBP9.12□□□□□ -0.95
USP39-214ENST00000474572 CACYBPQ9HB71 228 aaKnown RBP9.12□□□□□ -0.95
USP39-214ENST00000474572 FOLH1BQ9HBA9 442 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 FGF20Q9NP95 211 aaPredicted RBP9.12□□□□□ -0.95
USP39-214ENST00000474572 AKIP1Q9NQ31 210 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 FBXO8Q9NRD0 319 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 STARD5Q9NSY2 213 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 FBXO34Q9NWN3 711 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 IL20Q9NYY1 176 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 DNAJC27Q9NZQ0 273 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 SEMA5BQ9P283 1151 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 TESQ9UGI8 421 aaKnown RBP9.12□□□□□ -0.95
USP39-214ENST00000474572 FBXL21Q9UKT6 434 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 MRPS33Q9Y291 106 aaKnown RBP9.12□□□□□ -0.95
USP39-214ENST00000474572 B3GNT3Q9Y2A9 372 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 A3GALT2U3KPV4 340 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 PMF1-BGLAPU3KQ54 211 aa9.12□□□□□ -0.95
USP39-214ENST00000474572 SCN2AQ99250 2005 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 A0A0A6YYC8 382 aaPredicted RBP9.11□□□□□ -0.95
USP39-214ENST00000474572 GXYLT2A0PJZ3 443 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 TRAPPC13A5PLN9 417 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 TTC36A6NLP5 189 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 EFCAB9A8MZ26 197 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 NPIPB9F8W1W9 429 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 I3L1I5 382 aaPredicted RBP9.11□□□□□ -0.95
USP39-214ENST00000474572 FOXD2O60548 495 aaPredicted RBP9.11□□□□□ -0.95
USP39-214ENST00000474572 KCNK2O95069 426 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 TNNI3P19429 210 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 DRD5P21918 477 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 GADD45AP24522 165 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 MAOBP27338 520 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 HTR2AP28223 471 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 GCGRP47871 477 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 RGS6P49758 472 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 EMDP50402 254 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 VBP1P61758 197 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 TUBA1BP68363 451 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 BIKQ13323 160 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 COL9A2Q14055 689 aaPredicted RBP9.11□□□□□ -0.95
USP39-214ENST00000474572 DOC2BQ14184 412 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 GPR68Q15743 365 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 SYT16Q17RD7 645 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 ZSWIM7Q19AV6 140 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 TMEM44Q2T9K0 475 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 SYT14P1Q58G82 188 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 ARMCX4Q5H9R4 360 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 MRPL2Q5T653 305 aaKnown RBP9.11□□□□□ -0.95
USP39-214ENST00000474572 SLC27A4Q6P1M0 643 aa9.11□□□□□ -0.95
USP39-214ENST00000474572 ZNF620Q6ZNG0 422 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms