RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 B3GALT5-AS1P59052 145 aa18.42■□□□□ 0.54
PDLIM4-206ENST00000474421 HSPB3Q12988 150 aa18.42■□□□□ 0.54
PDLIM4-206ENST00000474421 PCLAFQ15004 111 aa18.42■□□□□ 0.54
PDLIM4-206ENST00000474421 RAET1LQ5VY80 246 aa18.42■□□□□ 0.54
PDLIM4-206ENST00000474421 RIBC1Q8N443 379 aaPredicted RBP18.42■□□□□ 0.54
PDLIM4-206ENST00000474421 PPCDCQ96CD2 204 aa18.42■□□□□ 0.54
PDLIM4-206ENST00000474421 FCRL1Q96LA6 429 aa18.42■□□□□ 0.54
PDLIM4-206ENST00000474421 DACH2Q96NX9 599 aa18.42■□□□□ 0.54
PDLIM4-206ENST00000474421 GATA5Q9BWX5 397 aaPredicted RBP18.42■□□□□ 0.54
PDLIM4-206ENST00000474421 TBL1XR1Q9BZK7 514 aa18.42■□□□□ 0.54
PDLIM4-206ENST00000474421 REEP4Q9H6H4 257 aa18.42■□□□□ 0.54
PDLIM4-206ENST00000474421 L2HGDHQ9H9P8 463 aa18.42■□□□□ 0.54
PDLIM4-206ENST00000474421 PACSIN3Q9UKS6 424 aa18.42■□□□□ 0.54
PDLIM4-206ENST00000474421 ASMTP46597 345 aa18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 RFX3P48380 749 aa18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 C17orf67Q0P5P2 114 aa18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 STX5Q13190 355 aa18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 GLYR1Q49A26 553 aaPredicted RBP18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 KANK2Q63ZY3 851 aa18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 Q6ZSR9 355 aa18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 ZNF551Q7Z340 670 aaPredicted RBP18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 LUZP2Q86TE4 346 aa18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 GCNT2Q8N0V5 402 aa18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 LINC01560Q8TB33 94 aa18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 GFM2Q969S9 779 aaKnown RBP18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 APOPT1Q96IL0 206 aa18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 PIGQQ9BRB3 760 aa18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 YIPF4Q9BSR8 244 aa18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 CXXC4Q9H2H0 198 aa18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 EML4Q9HC35 981 aaKnown RBP18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 ACSS1Q9NUB1 689 aaPredicted RBP18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 CCM2LQ9NUG4 571 aaPredicted RBP18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 GALNT8Q9NY28 637 aa18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 MED11Q9P086 117 aa18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 FIS1Q9Y3D6 152 aa18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 PTGDR2Q9Y5Y4 395 aa18.41■□□□□ 0.54
PDLIM4-206ENST00000474421 TLDC2A0PJX2 215 aa18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 SLC22A20A6NK97 555 aa18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 B4DXG7 233 aa18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 NPHS1O60500 1241 aa18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 UTS2O95399 124 aa18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 SDC1P18827 310 aa18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 MANFP55145 182 aaKnown RBP18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 RPL38P63173 70 aaKnown RBP18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 CDRT4Q8N9R6 151 aa18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 GPR151Q8TDV0 419 aa18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 DUSP19Q8WTR2 217 aa18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 HOXB13Q92826 284 aaPredicted RBP18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 MTERF3Q96E29 417 aa18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 C1GALT1C1Q96EU7 318 aa18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 TSSK3Q96PN8 268 aa18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 EQTNQ9NQ60 294 aa18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 FLRT3Q9NZU0 649 aa18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 SH3BP4Q9P0V3 963 aa18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 NTMQ9P121 344 aa18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 STOML1Q9UBI4 398 aa18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 HRNRQ86YZ3 2850 aaPredicted RBP18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 PCNX3Q9H6A9 2034 aa18.4■□□□□ 0.54
PDLIM4-206ENST00000474421 MAP1AP78559 2803 aaPredicted RBP18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 MTORP42345 2549 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 IGLV3-32A0A0A0MS00 114 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 A0A1W2PNV4 684 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 A8MXE2 369 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 MSTNO14793 375 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 LSM1O15116 133 aaKnown RBP18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 AKAP10O43572 662 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 TGM6O95932 706 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 FGF4P08620 206 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 LINC00032P0C843 101 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 PCYT1AP49585 367 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 PRR5P85299 388 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 OCRLQ01968 901 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 PDE7AQ13946 482 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 RFTN2Q52LD8 501 aaPredicted RBP18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 ANKRD26P1Q6NSI1 321 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 R3HCC1LQ7Z5L2 792 aaKnown RBP18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 CAMKMTQ7Z624 323 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 MARCH3Q86UD3 253 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 DDIASQ8IXT1 998 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 UBQLNLQ8IYU4 475 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 BANPQ8N9N5 519 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 OR2T11Q8NH01 316 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 CIDECQ96AQ7 238 aaPredicted RBP18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 MS4A4EQ96PG1 132 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 TUBB1Q9H4B7 451 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 NDRG3Q9UGV2 375 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 DNAJC15Q9Y5T4 150 aa18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 PRRC2AP48634 2157 aaKnown RBP18.39■□□□□ 0.53
PDLIM4-206ENST00000474421 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 C17orf51A8MQB3 221 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 TMEM114B3SHH9 223 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 TNFRSF21O75509 655 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 TNFSF13O75888 250 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 NKX2-2O95096 273 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 ANGPTL1O95841 491 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 NUDT17P0C025 328 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 MAPK1P28482 360 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 RPL3P39023 403 aaKnown RBP18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 MAP3K8P41279 467 aa18.38■□□□□ 0.53
PDLIM4-206ENST00000474421 FRKP42685 505 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms