RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 RAD51DO75771 328 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 SRP72O76094 671 aaKnown RBP5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 ESRRBO95718 433 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 FADS2O95864 444 aaKnown RBP5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 SPATA31D3P0C874 917 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 ACADSP16219 412 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 JUNBP17275 347 aaPredicted RBP5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 NDUFB7P17568 137 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 TPH1P17752 444 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 PCMT1P22061 227 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 FCGR2BP31994 310 aaPredicted RBP5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 OR3A3P47888 321 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 KCNJ2P63252 427 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 PUDPQ08623 228 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 LY6DQ14210 128 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 RBBP7Q16576 425 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 CBWD6Q4V339 395 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 CBWD3Q5JTY5 395 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 DOK6Q6PKX4 331 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 GLDNQ6ZMI3 551 aaPredicted RBP5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 SPATA31D4Q6ZUB0 917 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 MRPL21Q7Z2W9 205 aaKnown RBP5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 LYSMD2Q8IV50 215 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 FAM219AQ8IW50 185 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 STX19Q8N4C7 294 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 WFIKKN2Q8TEU8 576 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 RAB40AQ8WXH6 277 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 DAZLQ92904 295 aaKnown RBP5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 ERGIC1Q969X5 290 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 SLCO4A1Q96BD0 722 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 HARBI1Q96MB7 349 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 MAP3K3Q99759 626 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 TRMOQ9BU70 441 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 PLK3Q9H4B4 646 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 BCAS3Q9H6U6 928 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 KAT8Q9H7Z6 458 aaKnown RBP5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 LMAN1LQ9HAT1 526 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 PIGVQ9NUD9 493 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 CRIM1Q9NZV1 1036 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 TMEFF2Q9UIK5 374 aaPredicted RBP5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 TMEM184BQ9Y519 407 aaPredicted RBP5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 KPTNQ9Y664 436 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 ITPR1Q14643 2758 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 FAM92AA1XBS5 289 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 SMCO3A2RU48 225 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 GRID2IPA4D2P6 1211 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 ADARB2-AS1A8MUL3 147 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 GOSR2O14653 212 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 PRKRAO75569 313 aaKnown RBP5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 OR4F21O95013 312 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 TJP3O95049 919 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 OR6A2O95222 327 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 MPIG6BO95866 241 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 BCL10O95999 233 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 GSRP00390 522 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 IFNA10P01566 189 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 IFNA5P01569 189 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 PCCAP05165 728 aaPredicted RBP5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 THBDP07204 575 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 HOXC6P09630 235 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 FCGR2AP12318 317 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 MALP21145 153 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 GMPRP36959 345 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 BRCC3P46736 316 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 PPT1P50897 306 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 TPMTP51580 245 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 ADPRHP54922 357 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 CDC42EP1Q00587 391 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 ASAH1Q13510 395 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 DCAF6Q58WW2 860 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 LAIR1Q6GTX8 287 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 RHBDD2Q6NTF9 364 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 FAHD2BQ6P2I3 314 aaPredicted RBP5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 ULK3Q6PHR2 472 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 ASCL4Q6XD76 172 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 SLC16A14Q7RTX9 510 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 PUSL1Q8N0Z8 303 aaKnown RBP5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 GABRG1Q8N1C3 465 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 RIBC1Q8N443 379 aaPredicted RBP5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 SIRT6Q8N6T7 355 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 OR2L2Q8NH16 312 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 STOML3Q8TAV4 291 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 DNAJB3Q8WWF6 145 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 ACOT11Q8WXI4 607 aaPredicted RBP5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 TESCQ96BS2 214 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 FAHD2AQ96GK7 314 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 PRAP1Q96NZ9 151 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 LGMNQ99538 433 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 CMKLR1Q99788 373 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 C20orf24Q9BUV8 137 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 ULBP1Q9BZM6 244 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 UCK2Q9BZX2 261 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 LACRTQ9GZZ8 138 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 PPA2Q9H2U2 334 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 KIR3DX1Q9H7L2 352 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 ANKZF1Q9H8Y5 726 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 SIAEQ9HAT2 523 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 HRASLSQ9HDD0 168 aa5.68□□□□□ -1.5
SMARCE1-208ENST00000474246 PTTG3PQ9NZH4 202 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms