RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 ZCCHC12Q6PEW1 402 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 MARCH3Q86UD3 253 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 IFNEQ86WN2 208 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 RIMKLAQ8IXN7 391 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 ZNF781Q8N8C0 355 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 SLC16A11Q8NCK7 471 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 TNIP2Q8NFZ5 429 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 OR4K17Q8NGC6 315 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 ZPLD1Q8TCW7 415 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 DUSP19Q8WTR2 217 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 PIK3R3Q92569 461 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 SLC9A6Q92581 669 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 GIMAP5Q96F15 307 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 RMND5BQ96G75 393 aaPredicted RBP10.16□□□□□ -0.78
CKS1B-206ENST00000474215 MS4A4EQ96PG1 132 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 TRIB1Q96RU8 372 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 RTN4RQ9BZR6 473 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 C20orf27Q9GZN8 174 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 DSN1Q9H410 356 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 CALHM2Q9HA72 323 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 FLRT3Q9NZU0 649 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 PPP4R1LQ9P1A2 415 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 DKKL1Q9UK85 242 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 CACNA1DQ01668 2161 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 NBPF19A0A087WUL8 3843 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 CD8B2A6NJW9 211 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 C17orf51A8MQB3 221 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 KDM4EB2RXH2 506 aaPredicted RBP10.15□□□□□ -0.78
CKS1B-206ENST00000474215 B4DXG7 233 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 ERLIN1O75477 346 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 UTS2O95399 124 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 ALOX5P09917 674 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 ACP2P11117 423 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 G6PDP11413 515 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 BGNP21810 368 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 CHMP24386 653 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 STARP49675 285 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 DIO3P55073 304 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 WNT3P56703 355 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 CLDN8P56748 225 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 C17orf67Q0P5P2 114 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 RCAN2Q14206 197 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 PDCD2Q16342 344 aaPredicted RBP10.15□□□□□ -0.78
CKS1B-206ENST00000474215 LSM12Q3MHD2 195 aaKnown RBP10.15□□□□□ -0.78
CKS1B-206ENST00000474215 HHATQ5VTY9 493 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 SZRD1Q7Z422 152 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 DMRTC2Q8IXT2 367 aaPredicted RBP10.15□□□□□ -0.78
CKS1B-206ENST00000474215 KIRREL3Q8IZU9 778 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 KRTCAP2Q8N6L1 136 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 FADS6Q8N9I5 356 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 OR2M3Q8NG83 312 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 OR4C3Q8NH37 302 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 PSMA8Q8TAA3 256 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 FAM110BQ8TC76 370 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 NUDT8Q8WV74 236 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 OR5P2Q8WZ92 322 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 FAM120BQ96EK7 910 aaKnown RBP10.15□□□□□ -0.78
CKS1B-206ENST00000474215 C14orf79Q96F83 325 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 C16orf58Q96GQ5 468 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 SORT1Q99523 831 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 PAIP2Q9BPZ3 127 aaKnown RBP10.15□□□□□ -0.78
CKS1B-206ENST00000474215 TBL1XR1Q9BZK7 514 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 PTGES2Q9H7Z7 377 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 AKTIPQ9H8T0 292 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 SIRT3Q9NTG7 399 aaPredicted RBP10.15□□□□□ -0.78
CKS1B-206ENST00000474215 ZCCHC3Q9NUD5 404 aaKnown RBP10.15□□□□□ -0.78
CKS1B-206ENST00000474215 ASIC5Q9NY37 505 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 NOP53Q9NZM5 478 aaKnown RBP10.15□□□□□ -0.78
CKS1B-206ENST00000474215 MED11Q9P086 117 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 ZNF629Q9UEG4 869 aaPredicted RBP10.15□□□□□ -0.78
CKS1B-206ENST00000474215 HAO1Q9UJM8 370 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 SNX8Q9Y5X2 465 aa10.15□□□□□ -0.78
CKS1B-206ENST00000474215 PHF3Q92576 2039 aaKnown RBP10.15□□□□□ -0.78
CKS1B-206ENST00000474215 MBD3L4A6NDZ8 208 aaPredicted RBP10.14□□□□□ -0.79
CKS1B-206ENST00000474215 MBD3L3A6NE82 208 aaPredicted RBP10.14□□□□□ -0.79
CKS1B-206ENST00000474215 MBD3L5A6NJ08 208 aaPredicted RBP10.14□□□□□ -0.79
CKS1B-206ENST00000474215 H0Y3Z8 333 aa10.14□□□□□ -0.79
CKS1B-206ENST00000474215 DVL2O14641 736 aa10.14□□□□□ -0.79
CKS1B-206ENST00000474215 KCNK2O95069 426 aa10.14□□□□□ -0.79
CKS1B-206ENST00000474215 ANGPTL1O95841 491 aa10.14□□□□□ -0.79
CKS1B-206ENST00000474215 HMGN2P05204 90 aaKnown RBP10.14□□□□□ -0.79
CKS1B-206ENST00000474215 NGFRP08138 427 aa10.14□□□□□ -0.79
CKS1B-206ENST00000474215 TBXA2RP21731 343 aa10.14□□□□□ -0.79
CKS1B-206ENST00000474215 CCT3P49368 545 aaKnown RBP10.14□□□□□ -0.79
CKS1B-206ENST00000474215 PRIM2P49643 509 aa10.14□□□□□ -0.79
CKS1B-206ENST00000474215 LHX2P50458 406 aa10.14□□□□□ -0.79
CKS1B-206ENST00000474215 C21orf58P58505 322 aa10.14□□□□□ -0.79
CKS1B-206ENST00000474215 B3GALT5-AS1P59052 145 aa10.14□□□□□ -0.79
CKS1B-206ENST00000474215 SRYQ05066 204 aa10.14□□□□□ -0.79
CKS1B-206ENST00000474215 STX5Q13190 355 aa10.14□□□□□ -0.79
CKS1B-206ENST00000474215 BCL2A1Q16548 175 aa10.14□□□□□ -0.79
CKS1B-206ENST00000474215 DUSP5Q16690 384 aa10.14□□□□□ -0.79
CKS1B-206ENST00000474215 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.14□□□□□ -0.79
CKS1B-206ENST00000474215 PGS1Q32NB8 556 aa10.14□□□□□ -0.79
CKS1B-206ENST00000474215 GRAMD1BQ3KR37 738 aa10.14□□□□□ -0.79
CKS1B-206ENST00000474215 EXOSC6Q5RKV6 272 aaKnown RBP10.14□□□□□ -0.79
CKS1B-206ENST00000474215 POMZP3Q6PJE2 187 aa10.14□□□□□ -0.79
CKS1B-206ENST00000474215 APOOLQ6UXV4 268 aa10.14□□□□□ -0.79
CKS1B-206ENST00000474215 ANKRD42Q8N9B4 389 aa10.14□□□□□ -0.79
CKS1B-206ENST00000474215 NAXEQ8NCW5 288 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms