RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 PATL1Q86TB9 770 aaKnown RBP12.26□□□□□ -0.45
BRAT1-205ENST00000473879 SPPL2CQ8IUH8 684 aa12.26□□□□□ -0.45
BRAT1-205ENST00000473879 SLC44A2Q8IWA5 706 aaPredicted RBP12.26□□□□□ -0.45
BRAT1-205ENST00000473879 ZNF615Q8N8J6 731 aa12.26□□□□□ -0.45
BRAT1-205ENST00000473879 COX18Q8N8Q8 333 aa12.26□□□□□ -0.45
BRAT1-205ENST00000473879 SLC16A11Q8NCK7 471 aa12.26□□□□□ -0.45
BRAT1-205ENST00000473879 SIMC1Q8NDZ2 872 aa12.26□□□□□ -0.45
BRAT1-205ENST00000473879 OR1N1Q8NGS0 311 aa12.26□□□□□ -0.45
BRAT1-205ENST00000473879 C16orf52Q8NHV5 167 aa12.26□□□□□ -0.45
BRAT1-205ENST00000473879 CPT1CQ8TCG5 803 aa12.26□□□□□ -0.45
BRAT1-205ENST00000473879 ZNF721Q8TF20 911 aa12.26□□□□□ -0.45
BRAT1-205ENST00000473879 SLC38A5Q8WUX1 472 aa12.26□□□□□ -0.45
BRAT1-205ENST00000473879 PSMF1Q92530 271 aa12.26□□□□□ -0.45
BRAT1-205ENST00000473879 HOXB13Q92826 284 aaPredicted RBP12.26□□□□□ -0.45
BRAT1-205ENST00000473879 CDS1Q92903 461 aa12.26□□□□□ -0.45
BRAT1-205ENST00000473879 TMEM19Q96HH6 336 aa12.26□□□□□ -0.45
BRAT1-205ENST00000473879 VSTM2LQ96N03 204 aa12.26□□□□□ -0.45
BRAT1-205ENST00000473879 TRNT1Q96Q11 434 aaKnown RBP12.26□□□□□ -0.45
BRAT1-205ENST00000473879 RPS6KA6Q9UK32 745 aa12.26□□□□□ -0.45
BRAT1-205ENST00000473879 SAMD4AQ9UPU9 718 aaKnown RBP12.26□□□□□ -0.45
BRAT1-205ENST00000473879 MYO18BQ8IUG5 2567 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 DHRS12A0PJE2 317 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 MGRN1O60291 552 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 NKX2-2O95096 273 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 SERPINA1P01009 418 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 CLPSP04118 112 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 KDELR2P33947 212 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 MAP3K8P41279 467 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 DCAF7P61962 342 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 PSPHP78330 225 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 POU6F2P78424 691 aaPredicted RBP12.25□□□□□ -0.45
BRAT1-205ENST00000473879 MRPS22P82650 360 aaKnown RBP12.25□□□□□ -0.45
BRAT1-205ENST00000473879 RIPK1Q13546 671 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 INPP5JQ15735 1006 aaPredicted RBP12.25□□□□□ -0.45
BRAT1-205ENST00000473879 SYPL1Q16563 259 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 DUSP5Q16690 384 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 ARHGAP11BQ3KRB8 267 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 GPAT3Q53EU6 434 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 HLA-DQA1Q5Y7H0 255 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 PLAG1Q6DJT9 500 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 HEPHL1Q6MZM0 1159 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 ATCAYQ86WG3 371 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 KRT73Q86Y46 540 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 ARMC10Q8N2F6 343 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 CHDHQ8NE62 594 aaPredicted RBP12.25□□□□□ -0.45
BRAT1-205ENST00000473879 B3GNT7Q8NFL0 401 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 BRIX1Q8TDN6 353 aaKnown RBP12.25□□□□□ -0.45
BRAT1-205ENST00000473879 GPR151Q8TDV0 419 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 OTUB1Q96FW1 271 aaPredicted RBP12.25□□□□□ -0.45
BRAT1-205ENST00000473879 SLC35A4Q96G79 324 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 VMP1Q96GC9 406 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 ZNF607Q96SK3 696 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 SPATA5L1Q9BVQ7 753 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 BTBD2Q9BX70 525 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 TRIM45Q9H8W5 580 aaPredicted RBP12.25□□□□□ -0.45
BRAT1-205ENST00000473879 CACYBPQ9HB71 228 aaKnown RBP12.25□□□□□ -0.45
BRAT1-205ENST00000473879 Q9N2J8 555 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 DCAF13Q9NV06 445 aaKnown RBP12.25□□□□□ -0.45
BRAT1-205ENST00000473879 OLAHQ9NV23 265 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 ADPRHL2Q9NX46 363 aa12.25□□□□□ -0.45
BRAT1-205ENST00000473879 IGHV3-20A0A0C4DH32 117 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 A0A0G2JPF8 293 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 TCRBV5S2A0A599 114 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 A8MVJ9 347 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 HNRNPCL2B2RXH8 293 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 HNRNPCL3B7ZW38 293 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 SEC24DO94855 1032 aaPredicted RBP12.24□□□□□ -0.45
BRAT1-205ENST00000473879 PGM3O95394 542 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 CELA2AP08217 269 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 HNRNPCL4P0DMR1 293 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 ITGAMP11215 1152 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 AQP1P29972 269 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 GABRA3P34903 492 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 TRHRP34981 398 aaPredicted RBP12.24□□□□□ -0.45
BRAT1-205ENST00000473879 ERFP50548 548 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 GPR143P51810 404 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 PCBP3P57721 371 aaKnown RBP12.24□□□□□ -0.45
BRAT1-205ENST00000473879 SLC26A5P58743 744 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 EXT1Q16394 746 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 DCST2Q5T1A1 773 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 LRRC74BQ6ZQY2 392 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 LINC00696Q6ZRV3 163 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 WDR53Q7Z5U6 358 aaPredicted RBP12.24□□□□□ -0.45
BRAT1-205ENST00000473879 ANKFN1Q8N957 763 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 NFAM1Q8NET5 270 aaPredicted RBP12.24□□□□□ -0.45
BRAT1-205ENST00000473879 M1APQ8TC57 530 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 RASSF5Q8WWW0 418 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 LZICQ8WZA0 190 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 DUS3LQ96G46 650 aaKnown RBP12.24□□□□□ -0.45
BRAT1-205ENST00000473879 BTBD9Q96Q07 612 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 ITPAQ9BY32 194 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 UGT2B28Q9BY64 529 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 DCLRE1BQ9H816 532 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 BCL2L10Q9HD36 194 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 POLE3Q9NRF9 147 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 LUZP4Q9P127 313 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 OR10H1Q9Y4A9 318 aa12.24□□□□□ -0.45
BRAT1-205ENST00000473879 UBR5O95071 2799 aaPredicted RBP12.23□□□□□ -0.45
BRAT1-205ENST00000473879 C2orf92A0A1B0GVN3 265 aa12.23□□□□□ -0.45
BRAT1-205ENST00000473879 FRG2CA6NGY1 282 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 461.2 ms