RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 AGFG1P52594 562 aaKnown RBP4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 PLK1P53350 603 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 SLC7A9P82251 487 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 RCAN2Q14206 197 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 HLXQ14774 488 aaPredicted RBP4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 AKIRIN2Q53H80 203 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 NADSYN1Q6IA69 706 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 ALKAL2Q6UX46 152 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 C1orf186Q6ZWK4 172 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 TSPAN33Q86UF1 283 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 CYP4Z1Q86W10 505 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 BEND2Q8NDZ0 799 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 OR9A2Q8NGT5 310 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF384Q8TF68 577 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 GGHQ92820 318 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 ISG20Q96AZ6 181 aaKnown RBP4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 RAB3CQ96E17 227 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF354BQ96LW1 612 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF385AQ96PM9 386 aaKnown RBP4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 TMEM209Q96SK2 561 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 SIK2Q9H0K1 926 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 OR10A5Q9H207 317 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 SLC38A1Q9H2H9 487 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 IKZF4Q9H2S9 585 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 DPAGT1Q9H3H5 408 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 GAL3ST2Q9H3Q3 398 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 PRDM13Q9H4Q3 707 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 CERS4Q9HA82 394 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 EXOSC4Q9NPD3 245 aaKnown RBP4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 EIF2B3Q9NR50 452 aaKnown RBP4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 TEX10Q9NXF1 929 aaPredicted RBP4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 OR12D3Q9UGF7 316 aa4.82□□□□□ -1.64
TMEM39A-206ENST00000473684 HYKKA2RU49 373 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 TRAPPC13A5PLN9 417 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 GLTPD2A6NH11 291 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 G3V3Q6 166 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 AP4M1O00189 453 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 HRKO00198 91 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 SCELO95171 688 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 ALDOCP09972 364 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 PRKACGP22612 351 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 EDNRBP24530 442 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 MAPK3P27361 379 aaPredicted RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 APEX1P27695 318 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 ABCD3P28288 659 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 CDKN2CP42773 168 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 GPR15P49685 360 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 SLC16A1P53985 500 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 MEF2AQ02078 507 aaPredicted RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 OGDHQ02218 1023 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 PICALMQ13492 652 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 BOP1Q14137 746 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 GPR176Q14439 515 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 RPS6KA2Q15349 733 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 STRIP1Q5VSL9 837 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF57Q68EA5 555 aaPredicted RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 PAPD4Q6PIY7 484 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 CASP12Q6UXS9 341 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF783Q6ZMS7 281 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 CAMKMTQ7Z624 323 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 PLEKHH3Q7Z736 793 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 CUZD1Q86UP6 607 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 LRRTM4Q86VH4 590 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 NUDT13Q86X67 352 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 ARL14Q8N4G2 192 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 ZBTB34Q8NCN2 500 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 OR2L8Q8NGY9 312 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 STOML3Q8TAV4 291 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 CNOT9Q92600 299 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 TADA1Q96BN2 335 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 MVB12AQ96EY5 273 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 FAM193BQ96PV7 902 aaPredicted RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 NXF3Q9H4D5 531 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 BCO1Q9HAY6 547 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 CACYBPQ9HB71 228 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 SIRT7Q9NRC8 400 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 DHCR7Q9UBM7 475 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 FTSJ1Q9UET6 329 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 EIF2B4Q9UI10 523 aaKnown RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 USP18Q9UMW8 372 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 PLEKHM1Q9Y4G2 1056 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 TMEM184BQ9Y519 407 aaPredicted RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 HES2Q9Y543 173 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 A0A1W2PRB8 838 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 COLCA2A8K830 154 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 HMSDA8MTL9 139 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 MCRIP1C9JLW8 97 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 M0QZK8 103 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 IQCF3P0C7M6 154 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 OR8U8P0C7N1 319 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 STAG3L1P0CL83 205 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF44P15621 663 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 RCC1P18754 421 aaPredicted RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 CXCL2P19875 107 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 PXNP49023 591 aaPredicted RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 RGS4P49798 205 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 CACNB2Q08289 660 aaPredicted RBP4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 DYRK1AQ13627 763 aa4.81□□□□□ -1.64
TMEM39A-206ENST00000473684 DDX39BQ13838 428 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms