RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 SAXO2Q658L1 398 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 SLC25A25Q6KCM7 469 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 ZCCHC12Q6PEW1 402 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 BHLHB9Q6PI77 547 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 ANGPTL8Q6UXH0 198 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 GALNT10Q86SR1 603 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 DND1Q8IYX4 353 aaKnown RBP8.35□□□□□ -1.07
SMC4-214ENST00000472991 ZNF843Q8N446 348 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 TRIML2Q8N7C3 387 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 COX18Q8N8Q8 333 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 GOLM1Q8NBJ4 401 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 GALNT11Q8NCW6 608 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 OR5D16Q8NGK9 328 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 PIK3R3Q92569 461 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 GTF2H4Q92759 462 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 HOXB13Q92826 284 aaPredicted RBP8.35□□□□□ -1.07
SMC4-214ENST00000472991 CDS1Q92903 461 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 EFHD2Q96C19 240 aaPredicted RBP8.35□□□□□ -1.07
SMC4-214ENST00000472991 NEURL3Q96EH8 262 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 RMND5BQ96G75 393 aaPredicted RBP8.35□□□□□ -1.07
SMC4-214ENST00000472991 AURKBQ96GD4 344 aaPredicted RBP8.35□□□□□ -1.07
SMC4-214ENST00000472991 ACTRT3Q9BYD9 372 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 EPN3Q9H201 632 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 SERHL2Q9H4I8 314 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 SLC52A3Q9NQ40 469 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 MRGBPQ9NV56 204 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 ARMCX1Q9P291 453 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 ADAM21Q9UKJ8 722 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 FAF1Q9UNN5 650 aaPredicted RBP8.35□□□□□ -1.07
SMC4-214ENST00000472991 KLF13Q9Y2Y9 288 aaPredicted RBP8.35□□□□□ -1.07
SMC4-214ENST00000472991 CHCHD2Q9Y6H1 151 aaPredicted RBP8.35□□□□□ -1.07
SMC4-214ENST00000472991 CAPN7Q9Y6W3 813 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 NBASA2RRP1 2371 aa8.35□□□□□ -1.07
SMC4-214ENST00000472991 A0A096LPI6 279 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 A0A1W2PP18 115 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 TP53I11O14683 189 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 ANGPT2O15123 496 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 TSPAN2O60636 221 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 UGT2B11O75310 529 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 KCNH1O95259 989 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 IGKV1D-16P01601 117 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 SNRPB2P08579 225 aaKnown RBP8.34□□□□□ -1.07
SMC4-214ENST00000472991 KRT16P08779 473 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 NAGAP17050 411 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 HOXB9P17482 250 aaPredicted RBP8.34□□□□□ -1.07
SMC4-214ENST00000472991 MATN1P21941 496 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 PTPN6P29350 595 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 TRPC1P48995 793 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 MAN2A2P49641 1150 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 PSPHP78330 225 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 POU6F2P78424 691 aaPredicted RBP8.34□□□□□ -1.07
SMC4-214ENST00000472991 MRPS22P82650 360 aaKnown RBP8.34□□□□□ -1.07
SMC4-214ENST00000472991 DECR1Q16698 335 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 CYP27C1Q4G0S4 372 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 SLC22A10Q63ZE4 541 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 BICRALQ6AI39 1079 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 RPUSD3Q6P087 351 aaKnown RBP8.34□□□□□ -1.07
SMC4-214ENST00000472991 TNFAIP8L2Q6P589 184 aaPredicted RBP8.34□□□□□ -1.07
SMC4-214ENST00000472991 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.34□□□□□ -1.07
SMC4-214ENST00000472991 FBXW8Q8N3Y1 598 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 BCORP1Q8N888 145 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 FAM98AQ8NCA5 519 aaKnown RBP8.34□□□□□ -1.07
SMC4-214ENST00000472991 PNPT1Q8TCS8 783 aaKnown RBP8.34□□□□□ -1.07
SMC4-214ENST00000472991 ADAMTS15Q8TE58 950 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 PAQR8Q8TEZ7 354 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 ZFP90Q8TF47 636 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 DIO2Q92813 273 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 HGDQ93099 445 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 SLC35A4Q96G79 324 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 SGCZQ96LD1 299 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 COL21A1Q96P44 957 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 OR7D2Q96RA2 312 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 NODALQ96S42 347 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 ADOQ96SZ5 270 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 STACQ99469 402 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 PAIP1Q9H074 479 aaKnown RBP8.34□□□□□ -1.07
SMC4-214ENST00000472991 RASSF4Q9H2L5 321 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 OR51I1Q9H343 314 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 PIGUQ9H490 435 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 DUSP22Q9NRW4 184 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 SACM1LQ9NTJ5 587 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 DEPPQ9NTK1 212 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 LEF1Q9UJU2 399 aaPredicted RBP8.34□□□□□ -1.07
SMC4-214ENST00000472991 CNOT11Q9UKZ1 510 aaKnown RBP8.34□□□□□ -1.07
SMC4-214ENST00000472991 PCDHGB6Q9Y5F9 930 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 KCNE3Q9Y6H6 103 aa8.34□□□□□ -1.07
SMC4-214ENST00000472991 MED12Q93074 2177 aa8.34□□□□□ -1.08
SMC4-214ENST00000472991 OR6C70A6NIJ9 312 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 B8ZZF3 427 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 LINC01387J3KSC0 135 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 PEX1O43933 1283 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 CCDC22O60826 627 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 SMNDC1O75940 238 aaKnown RBP eCLIP8.33□□□□□ -1.082e-16■■■■■ 67.6
SMC4-214ENST00000472991 KCNK2O95069 426 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 RASAL1O95294 804 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 KRT75O95678 551 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 IL33O95760 270 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 P04436 131 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 ZCCHC18P0CG32 403 aa8.33□□□□□ -1.08
SMC4-214ENST00000472991 OR12D1P0DN82 309 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms