RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, human

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-215	ENST00000472096	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	DOCK7	Q96N67	2140 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	PRSS44	E7EML9	344 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	KLF11	O14901	512 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	HDAC3	O15379	428 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	SCO2	O43819	266 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	WDR1	O75083	606 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	KCNH1	O95259	989 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	IGKV1D-16	P01601	117 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	RFX3	P48380	749 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	PSMD4	P55036	377 aa	Known RBP	13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	TOMM20	Q15388	145 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	CDSN	Q15517	529 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	LSM12	Q3MHD2	195 aa	Known RBP	13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	EIPR1	Q53HC9	387 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	WIPI1	Q5MNZ9	446 aa	Predicted RBP	13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	TMEM211	Q6ICI0	200 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	ZNF585A	Q6P3V2	769 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	HDX	Q7Z353	690 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	PLCZ1	Q86YW0	608 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	SLC16A11	Q8NCK7	471 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	FAM83F	Q8NEG4	500 aa	Predicted RBP	13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	SFXN5	Q8TD22	340 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	GPR151	Q8TDV0	419 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	SLC9A6	Q92581	669 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	SH3GL2	Q99962	352 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	DPY30	Q9C005	99 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	OR2B2	Q9GZK3	357 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	CXorf36	Q9H7Y0	433 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	FAM120C	Q9NX05	1096 aa	Known RBP	13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	FBXL2	Q9UKC9	423 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	SLC6A5	Q9Y345	797 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	FAM215A	Q9Y5M1	114 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	SNX8	Q9Y5X2	465 aa		13.72	□□□□□ -0.21
CALD1-215	ENST00000472096	CACNA1D	Q01668	2161 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	TRPC5OS	A6NMA1	111 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	C17orf51	A8MQB3	221 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096		B4DXG7	233 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	ANKRD28	O15084	1053 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	FADS1	O60427	444 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	HMGN2	P05204	90 aa	Known RBP	13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	ALOX5	P09917	674 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	ALDOC	P09972	364 aa	Known RBP	13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	KIT	P10721	976 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	DCT	P40126	519 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	PRIM2	P49643	509 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	NUP107	P57740	925 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	TP53BP2	Q13625	1128 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	LASP1	Q14847	261 aa	Known RBP	13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	DUSP5	Q16690	384 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	PGS1	Q32NB8	556 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	NHSL2	Q5HYW2	709 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	C1orf185	Q5T7R7	199 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	ZNF787	Q6DD87	383 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	RTL6	Q6ICC9	239 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	OR4F3	Q6IEY1	312 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	ZCCHC12	Q6PEW1	402 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	YRDC	Q86U90	279 aa	Known RBP	13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	WDR75	Q8IWA0	830 aa	Known RBP	13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	OR56A1	Q8NGH5	318 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	JADE3	Q92613	823 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	SDCCAG3	Q96C92	435 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	OTUB1	Q96FW1	271 aa	Predicted RBP	13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	C16orf58	Q96GQ5	468 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	VIPAS39	Q9H9C1	493 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	PPP4R1L	Q9P1A2	415 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	PCDHGB3	Q9Y5G1	929 aa		13.71	□□□□□ -0.21
CALD1-215	ENST00000472096	UNC79	Q9P2D8	2635 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	GOLGA8Q	A0A0J9YX86	632 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	GOLGA8O	A6NCC3	632 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	GOLGA8N	F8WBI6	632 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	SLCO1B7	G3V0H7	640 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	CBR3	O75828	277 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	UTS2	O95399	124 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	CLDN14	O95500	239 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	GABRA1	P14867	456 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	GRN	P28799	593 aa	Known RBP	13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	EPHA3	P29320	983 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	SOAT1	P35610	550 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	CCT3	P49368	545 aa	Known RBP	13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	CLNS1A	P54105	237 aa	Known RBP	13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	WNT3	P56703	355 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	HBA1	P69905	142 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	GRAMD1B	Q3KR37	738 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	SPDYE7P	Q495Y7	208 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	DCST1	Q5T197	706 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	VASN	Q6EMK4	673 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	OR5M10	Q6IEU7	315 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	B3GNT6	Q6ZMB0	384 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	GALNT10	Q86SR1	603 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	ULK2	Q8IYT8	1036 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	CLECL1	Q8IZS7	167 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	COX18	Q8N8Q8	333 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	OR8J2	Q8NGG1	315 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	ZNF75CP	Q92670	426 aa	Predicted RBP	13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	RND1	Q92730	232 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	TESC	Q96BS2	214 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	MOAP1	Q96BY2	351 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	DTNBP1	Q96EV8	351 aa		13.7	□□□□□ -0.22
CALD1-215	ENST00000472096	STAC	Q99469	402 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms