RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 LRRC37BQ96QE4 947 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 BARD1Q99728 777 aaKnown RBP11.29□□□□□ -0.6
PRKCB-205ENST00000472066 DOHHQ9BU89 302 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 RAD21L1Q9H4I0 556 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 IL1RL2Q9HB29 575 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 ASF1BQ9NVP2 202 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 TUBA8Q9NY65 449 aaPredicted RBP11.29□□□□□ -0.6
PRKCB-205ENST00000472066 KLRF1Q9NZS2 232 aa11.29□□□□□ -0.6
PRKCB-205ENST00000472066 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.29□□□□□ -0.6
PRKCB-205ENST00000472066 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.29□□□□□ -0.6
PRKCB-205ENST00000472066 SPENQ96T58 3664 aaKnown RBP11.29□□□□□ -0.6
PRKCB-205ENST00000472066 CROCCQ5TZA2 2017 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 C2orf72A6NCS6 295 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 EVPLLA8MZ36 301 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 FCMRO60667 390 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 TRIM3O75382 744 aaPredicted RBP11.28□□□□□ -0.6
PRKCB-205ENST00000472066 NPPAP01160 153 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 CRYABP02511 175 aaKnown RBP11.28□□□□□ -0.6
PRKCB-205ENST00000472066 ATP6V1C1P21283 382 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 TBXA2RP21731 343 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 PPIBP23284 216 aaKnown RBP11.28□□□□□ -0.6
PRKCB-205ENST00000472066 EVI2BP34910 448 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 RFC3P40938 356 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 GAS1P54826 345 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 C19orf57Q0VDD7 668 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 FUT5Q11128 374 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 GRAMD1BQ3KR37 738 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 RNFT1Q5M7Z0 435 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 AP1ARQ63HQ0 302 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 ZNF324BQ6AW86 544 aaPredicted RBP11.28□□□□□ -0.6
PRKCB-205ENST00000472066 FAM180AQ6UWF9 173 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 C16orf62Q7Z3J2 963 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 PACS2Q86VP3 889 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 PCYOX1LQ8NBM8 494 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 CCDC197Q8NCU1 140 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 CPT1CQ8TCG5 803 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 BCAS4Q8TDM0 211 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 ROPN1LQ96C74 230 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 CMTM5Q96DZ9 223 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 ANKRD27Q96NW4 1050 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 CGREF1Q99674 301 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 CPPED1Q9BRF8 314 aaPredicted RBP11.28□□□□□ -0.6
PRKCB-205ENST00000472066 OSBPL11Q9BXB4 747 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 HOXD1Q9GZZ0 328 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 IKZF5Q9H5V7 419 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 GALNT9Q9HCQ5 603 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 UBQLN4Q9NRR5 601 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 THUMPD1Q9NXG2 353 aaKnown RBP11.28□□□□□ -0.6
PRKCB-205ENST00000472066 ABCG2Q9UNQ0 655 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 LIPT1Q9Y234 373 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 CHD6Q8TD26 2715 aa11.28□□□□□ -0.6
PRKCB-205ENST00000472066 NDUFAB1O14561 156 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 STX11O75558 287 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 GLSO94925 669 aaPredicted RBP11.27□□□□□ -0.61
PRKCB-205ENST00000472066 NGFRP08138 427 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 GUSBP08236 651 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 TFPTP0C1Z6 253 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 GPX2P18283 190 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 PRDX6P30041 224 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 CLK3P49761 638 aaKnown RBP11.27□□□□□ -0.61
PRKCB-205ENST00000472066 DSTNP60981 165 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 PPIAP62937 165 aaKnown RBP11.27□□□□□ -0.61
PRKCB-205ENST00000472066 PLGLB1Q02325 96 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 FADDQ13158 208 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 CAPRIN1Q14444 709 aaKnown RBP11.27□□□□□ -0.61
PRKCB-205ENST00000472066 MAPK11Q15759 364 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 SYPL1Q16563 259 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 HYAL4Q2M3T9 481 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 TRMT5Q32P41 509 aaKnown RBP11.27□□□□□ -0.61
PRKCB-205ENST00000472066 FLYWCH1Q4VC44 716 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 GPAT3Q53EU6 434 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 FNDC7Q5VTL7 733 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 NANOGP8Q6NSW7 305 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 APOOLQ6UXV4 268 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 OLIG3Q7RTU3 272 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 PRICKLE2Q7Z3G6 844 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 MARCH3Q86UD3 253 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 ANKFN1Q8N957 763 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 FAR1Q8WVX9 515 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 LRRC58Q96CX6 371 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 RCN3Q96D15 328 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 TMEM41AQ96HV5 264 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 JSRP1Q96MG2 331 aaPredicted RBP11.27□□□□□ -0.61
PRKCB-205ENST00000472066 TRNT1Q96Q11 434 aaKnown RBP11.27□□□□□ -0.61
PRKCB-205ENST00000472066 THUMPD3Q9BV44 507 aaKnown RBP11.27□□□□□ -0.61
PRKCB-205ENST00000472066 TTTY12Q9BZ98 90 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 RTN4RQ9BZR6 473 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 ZNF350Q9GZX5 532 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 SAP130Q9H0E3 1048 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 NANOGQ9H9S0 305 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 ZFP64Q9NPA5 681 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 AGPAT4Q9NRZ5 378 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 GID8Q9NWU2 228 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 MKLN1Q9UL63 735 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 BOKQ9UMX3 212 aaPredicted RBP11.27□□□□□ -0.61
PRKCB-205ENST00000472066 CORO2BQ9UQ03 480 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 ZFYVE26Q68DK2 2539 aa11.27□□□□□ -0.61
PRKCB-205ENST00000472066 LRRC3CA6NJW4 275 aa11.26□□□□□ -0.61
PRKCB-205ENST00000472066 NPIPB9F8W1W9 429 aa11.26□□□□□ -0.61
PRKCB-205ENST00000472066 ADAM10O14672 748 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms