RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 COPZ2Q9P299 210 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 PFDN2Q9UHV9 154 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 B3GALT1Q9Y5Z6 326 aa8.1□□□□□ -1.11
CD47-204ENST00000471694 GXYLT2A0PJZ3 443 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 DCDC2BA2VCK2 349 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 GLCEO94923 617 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 ATF6P18850 670 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 FRKP42685 505 aaPredicted RBP8.09□□□□□ -1.11
CD47-204ENST00000471694 RGS6P49758 472 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 RUNDC3AQ59EK9 446 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 ZNF554Q86TJ5 538 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 ZSWIM9Q86XI8 627 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 OR52N2Q8NGI0 321 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 IL1F10Q8WWZ1 152 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 LRTOMTQ8WZ04 291 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 KCTD7Q96MP8 289 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 BOCQ9BWV1 1114 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 RNF38Q9H0F5 515 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 FAM234AQ9H0X4 552 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 P2RY12Q9H244 342 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 SEMA6CQ9H3T2 930 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 NPIPA5A0A0B4J1W7 369 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 PMS2P1A4D2B8 440 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 NUDT19A8MXV4 375 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 NPIPA7E9PJI5 369 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 UGDHO60701 494 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 GALR3O60755 368 aaPredicted RBP8.09□□□□□ -1.11
CD47-204ENST00000471694 PIAS2O75928 621 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 ITGB2P05107 769 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 NPIPA8P0DM63 369 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 ZNF12P17014 697 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 NDUFB7P17568 137 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 AZGP1P25311 298 aaKnown RBP8.09□□□□□ -1.11
CD47-204ENST00000471694 AGFG1P52594 562 aaKnown RBP8.09□□□□□ -1.11
CD47-204ENST00000471694 RAB11BQ15907 218 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 SPANXN4Q5MJ08 99 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 OGFOD2Q6N063 350 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 PLET1Q6UQ28 207 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 SHFQ7M4L6 423 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 OR2T4Q8NH00 348 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 CGREF1Q99674 301 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 MTHFD2LQ9H903 347 aaPredicted RBP8.09□□□□□ -1.11
CD47-204ENST00000471694 OR6C2Q9NZP2 312 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 SLC35A3Q9Y2D2 325 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 TCRBV7S3A2A0A539 114 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 PLOD2O00469 737 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 DIRAS1O95057 198 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 MT-CO3P00414 261 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 GLULP15104 373 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 SLC6A4P31645 630 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 PTDSS1P48651 473 aaKnown RBP8.09□□□□□ -1.11
CD47-204ENST00000471694 EFNA3P52797 238 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 XIAPP98170 497 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 PPA1Q15181 289 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 ZNF584Q8IVC4 421 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 ELOVL3Q9HB03 270 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 LRP6O75581 1613 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 FABP12A6NFH5 140 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 TMEM189-UBE2V1I3L0A0 370 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 IGHG1P01857 330 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 GSTP1P09211 210 aaKnown RBP8.09□□□□□ -1.11
CD47-204ENST00000471694 SLC35E2BP0CK96 405 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 SGSHP51688 502 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 DCAF7P61962 342 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 SLC25A11Q02978 314 aaKnown RBP8.09□□□□□ -1.11
CD47-204ENST00000471694 SPNS3Q6ZMD2 512 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 SIAH1Q8IUQ4 282 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 OR4K15Q8NH41 348 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 UBTD1Q9HAC8 227 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 ZNF358Q9NW07 568 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 C5AR2Q9P296 337 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 SLC7A7Q9UM01 511 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 MGAT4BQ9UQ53 548 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 A0A1B0GX78 115 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 KANTRA0A1W2PQU2 76 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 H0YAE9 185 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 ITIH1P19827 911 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 RPS5P46782 204 aaKnown RBP8.09□□□□□ -1.11
CD47-204ENST00000471694 ID4P47928 161 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 ARL16Q0P5N6 197 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 ANKDD1AQ495B1 522 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 TMEM211Q6ICI0 200 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 ASB16Q96NS5 453 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 SLC30A3Q99726 388 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 NARFLQ9H6Q4 476 aa8.09□□□□□ -1.11
CD47-204ENST00000471694 THAP10Q9P2Z0 257 aaPredicted RBP8.09□□□□□ -1.11
CD47-204ENST00000471694 H0YGG7 62 aa8.08□□□□□ -1.12
CD47-204ENST00000471694 LGALS8O00214 317 aa8.08□□□□□ -1.12
CD47-204ENST00000471694 S100A9P06702 114 aaKnown RBP8.08□□□□□ -1.12
CD47-204ENST00000471694 FCGR2AP12318 317 aa8.08□□□□□ -1.12
CD47-204ENST00000471694 GPR85P60893 370 aa8.08□□□□□ -1.12
CD47-204ENST00000471694 MPPED2Q15777 294 aa8.08□□□□□ -1.12
CD47-204ENST00000471694 NTRK2Q16620 822 aa8.08□□□□□ -1.12
CD47-204ENST00000471694 KCTD11Q693B1 232 aa8.08□□□□□ -1.12
CD47-204ENST00000471694 KLHDC10Q6PID8 442 aa8.08□□□□□ -1.12
CD47-204ENST00000471694 CENPNQ96H22 339 aaPredicted RBP8.08□□□□□ -1.12
CD47-204ENST00000471694 CNN2Q99439 309 aaKnown RBP8.08□□□□□ -1.12
CD47-204ENST00000471694 PIP5K1AQ99755 562 aa8.08□□□□□ -1.12
CD47-204ENST00000471694 SMOC1Q9H4F8 434 aa8.08□□□□□ -1.12
CD47-204ENST00000471694 COQ4Q9Y3A0 265 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms