RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 SLITRK5O94991 958 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 PLGP00747 810 aaPredicted RBP8.22□□□□□ -1.09
CPSF4-211ENST00000471455 HSD3B1P14060 373 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 PAX1P15863 534 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 PCSK2P16519 638 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 HK1P19367 917 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 TBXA2RP21731 343 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 TCEA1P23193 301 aaKnown RBP8.22□□□□□ -1.09
CPSF4-211ENST00000471455 HSD3B2P26439 372 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 NOS3P29474 1203 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 EVI2BP34910 448 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 MRPS35P82673 323 aaKnown RBP8.22□□□□□ -1.09
CPSF4-211ENST00000471455 IRF9Q00978 393 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 DMTNQ08495 405 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 TRAF3Q13114 568 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 UAP1Q16222 522 aaPredicted RBP8.22□□□□□ -1.09
CPSF4-211ENST00000471455 TSNAXIP1Q2TAA8 658 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 TRMT12Q53H54 448 aaKnown RBP8.22□□□□□ -1.09
CPSF4-211ENST00000471455 ZNF628Q5EBL2 1059 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 SGO1Q5FBB7 561 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 TECRLQ5HYJ1 363 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 VWA1Q6PCB0 445 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 ZNF474Q6S9Z5 364 aaPredicted RBP8.22□□□□□ -1.09
CPSF4-211ENST00000471455 SELENOMQ8WWX9 145 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 ZC3HAV1LQ96H79 300 aaKnown RBP8.22□□□□□ -1.09
CPSF4-211ENST00000471455 PIGQQ9BRB3 760 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 PINK1Q9BXM7 581 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 ADAM19Q9H013 955 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 OPN3Q9H1Y3 402 aaPredicted RBP8.22□□□□□ -1.09
CPSF4-211ENST00000471455 VPS11Q9H270 941 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 RNF122Q9H9V4 155 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 TAS2R9Q9NYW1 312 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 PCTPQ9UKL6 214 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 RTTNQ86VV8 2226 aa8.22□□□□□ -1.09
CPSF4-211ENST00000471455 VPS13CQ709C8 3753 aa8.21□□□□□ -1.09
CPSF4-211ENST00000471455 SONP18583 2426 aaKnown RBP8.21□□□□□ -1.09
CPSF4-211ENST00000471455 SEC14L5O43304 696 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 SCO2O43819 266 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 ZIC3O60481 467 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 TSPAN2O60636 221 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 IFNA2P01563 188 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 KRT6AP02538 564 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 KRT6BP04259 564 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 TP53P04637 393 aaPredicted RBP8.21□□□□□ -1.1
CPSF4-211ENST00000471455 CCKARP32238 428 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 KIR2DL2P43627 348 aaPredicted RBP8.21□□□□□ -1.1
CPSF4-211ENST00000471455 GSTM5P46439 218 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 KRT6CP48668 564 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 PSMD4P55036 377 aaKnown RBP8.21□□□□□ -1.1
CPSF4-211ENST00000471455 PLTPP55058 493 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 ATP5J2P56134 94 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 CTBP2P56545 445 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 GALNT1Q10472 559 aaPredicted RBP8.21□□□□□ -1.1
CPSF4-211ENST00000471455 ZNF155Q12901 538 aaPredicted RBP8.21□□□□□ -1.1
CPSF4-211ENST00000471455 HEPACAMQ14CZ8 416 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 PON3Q15166 354 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 LTB4RQ15722 352 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 SGCBQ16585 318 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 GLYR1Q49A26 553 aaPredicted RBP8.21□□□□□ -1.1
CPSF4-211ENST00000471455 OR5M10Q6IEU7 315 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 PLXDC2Q6UX71 529 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 ZNF704Q6ZNC4 412 aaPredicted RBP8.21□□□□□ -1.1
CPSF4-211ENST00000471455 FAM214BQ7L5A3 538 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 ZNF550Q7Z398 422 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 STK32CQ86UX6 486 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 FAM9CQ8IZT9 166 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 C1orf52Q8N6N3 182 aaKnown RBP8.21□□□□□ -1.1
CPSF4-211ENST00000471455 OR4F6Q8NGB9 312 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 OR6K3Q8NGY3 331 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 PPP1R14CQ8TAE6 165 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 RNF138Q8WVD3 245 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 FIG4Q92562 907 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 TM4SF18Q96CE8 201 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 MTBPQ96DY7 904 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 PHF21BQ96EK2 531 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 CNRIP1Q96F85 164 aaPredicted RBP8.21□□□□□ -1.1
CPSF4-211ENST00000471455 VSTM2LQ96N03 204 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 ZNF681Q96N22 645 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 PRRG4Q9BZD6 226 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 KLHL4Q9C0H6 718 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 FOLH1BQ9HBA9 442 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 PAQR5Q9NXK6 330 aaPredicted RBP8.21□□□□□ -1.1
CPSF4-211ENST00000471455 GRHL1Q9NZI5 618 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 XPR1Q9UBH6 696 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 VPS29Q9UBQ0 182 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 MCM8Q9UJA3 840 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 SNX8Q9Y5X2 465 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 AP4B1Q9Y6B7 739 aa8.21□□□□□ -1.1
CPSF4-211ENST00000471455 USF3Q68DE3 2245 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.2□□□□□ -1.1
CPSF4-211ENST00000471455 GNG14A0A1W2PPG7 69 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 CCDC151A5D8V7 595 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 H3BML4 177 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 RAD51CO43502 376 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 PCDH7O60245 1069 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 PLOD3O60568 738 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 CRLF1O75462 422 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 PDYNP01213 254 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 CGAP01215 116 aa8.2□□□□□ -1.1
CPSF4-211ENST00000471455 RPS17P08708 135 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms