RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 TGM3Q08188 693 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 FAM27E3Q08E93 113 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 FOXF2Q12947 444 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 ACAP2Q15057 778 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 TRIM40Q6P9F5 258 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 NXPE4Q6UWF7 544 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 UGT2A3Q6UWM9 527 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 ENPP6Q6UWR7 440 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 MBOAT1Q6ZNC8 495 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 SLC29A4Q7RTT9 530 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 GALNT7Q86SF2 657 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 RNF148Q8N7C7 305 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 MAPK1IP1LQ8NDC0 245 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 TMEM52Q8NDY8 209 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 OR10G3Q8NGC4 313 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 ZNF721Q8TF20 911 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 EEF1AKMT1Q8WVE0 214 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 EXT2Q93063 718 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 NEIL2Q969S2 332 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 ZBED6CLQ96FA7 236 aaPredicted RBP8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 RBM18Q96H35 190 aaKnown RBP8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 SENP5Q96HI0 755 aaPredicted RBP8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 QRFPRQ96P65 431 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 UCN2Q96RP3 112 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 TRMOQ9BU70 441 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 BEX2Q9BXY8 128 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 MRPS26Q9BYN8 205 aaKnown RBP8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 MEAF6Q9HAF1 191 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 PROK2Q9HC23 129 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 ELOVL5Q9NYP7 299 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 TAS2R13Q9NYV9 303 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 CNOT11Q9UKZ1 510 aaKnown RBP8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 DAPP1Q9UN19 280 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 CLDN16Q9Y5I7 305 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 AP4B1Q9Y6B7 739 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 CHCHD2Q9Y6H1 151 aaPredicted RBP8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 KCNE2Q9Y6J6 123 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 ABCA1O95477 2261 aa8.1□□□□□ -1.11
SYNGAP1-205ENST00000470232 HEATR5AQ86XA9 2040 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 MYOCOSA0A1B0GUC4 107 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 SMIM31A0A1B0GVY4 71 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 ANKDD1BA6NHY2 528 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 C16orf97H3BN30 126 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 CYR61O00622 381 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 ACOT8O14734 319 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 SIAH2O43255 324 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 DNAJA2O60884 412 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 CRHP06850 196 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 FBXO45P0C2W1 286 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 FAM58BPP0C7Q3 252 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 SMIM18P0DKX4 95 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 POU2F1P14859 743 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 IMPDH1P20839 514 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 GSTT1P30711 240 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 THBS2P35442 1172 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 MSX2P35548 267 aaPredicted RBP8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 KCNJ5P48544 419 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 HNRNPFP52597 415 aaKnown RBP8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 PLA2G16P53816 162 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 NR1H2P55055 460 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 LIM2P55344 173 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 SH3BGRP55822 239 aaPredicted RBP8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 TRAP1Q12931 704 aaKnown RBP8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 CAPRIN1Q14444 709 aaKnown RBP8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 NTRK2Q16620 822 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 UNC50Q53HI1 259 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 AP1ARQ63HQ0 302 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 ZNF549Q6P9A3 640 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 HACD2Q6Y1H2 254 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 RPS27LQ71UM5 84 aaKnown RBP8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 KRT78Q8N1N4 520 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 GALNT4Q8N4A0 578 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 FBXL8Q96CD0 374 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 REPS1Q96D71 796 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 MS4A6EQ96DS6 147 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 PHF21BQ96EK2 531 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 DTNBP1Q96EV8 351 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 CNBD2Q96M20 576 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 GNRHR2Q96P88 292 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 DGAT2Q96PD7 388 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 OR4K3Q96R72 315 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 C19orf24Q9BVV8 132 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 TRIM15Q9C019 465 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 ROGDIQ9GZN7 287 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 SPNS1Q9H2V7 528 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 UBQLN3Q9H347 655 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 GSTO2Q9H4Y5 243 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 ALG9Q9H6U8 611 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 LRTM1Q9HBL6 345 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 LPAR3Q9UBY5 353 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 PTBP2Q9UKA9 531 aaKnown RBP8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 MED16Q9Y2X0 877 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 VWA7Q9Y334 891 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 TRAF6Q9Y4K3 522 aa8.09□□□□□ -1.11
SYNGAP1-205ENST00000470232 A0A0G2JN53 185 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 LRIT2A6NDA9 550 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 C4orf51C9J302 202 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 SUPT7LO94864 414 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 ETHE1O95571 254 aa8.08□□□□□ -1.12
SYNGAP1-205ENST00000470232 ENO2P09104 434 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms