RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 KLHL28Q9NXS3 571 aa12.76□□□□□ -0.37
BRCA1-209ENST00000470026 SPHK1Q9NYA1 384 aa12.76□□□□□ -0.37
BRCA1-209ENST00000470026 NUFIP1Q9UHK0 495 aaKnown RBP12.76□□□□□ -0.37
BRCA1-209ENST00000470026 NOX1Q9Y5S8 564 aa12.76□□□□□ -0.37
BRCA1-209ENST00000470026 SNRNP200O75643 2136 aaKnown RBP12.75□□□□□ -0.37
BRCA1-209ENST00000470026 DOCK9Q9BZ29 2069 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 SMIM30A4D0T7 59 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 DUXAA6NLW8 204 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 SGK494L7N484 410 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 LATO43561 262 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 FCMRO60667 390 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 HPGDSO60760 199 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 YES1P07947 543 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 SSTR4P31391 388 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 RGS8P57771 180 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-209ENST00000470026 STXBP1P61764 594 aaKnown RBP12.75□□□□□ -0.37
BRCA1-209ENST00000470026 QPRTQ15274 297 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 FAM214AQ32MH5 1076 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 TIGD3Q6B0B8 471 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 MFSD12Q6NUT3 480 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 CDC73Q6P1J9 531 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 ZNF322Q6U7Q0 402 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-209ENST00000470026 TMEM91Q6ZNR0 172 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 PLEKHM3Q6ZWE6 761 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 MARCH9Q86YJ5 346 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 NRMQ8IXM6 262 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 GANCQ8TET4 914 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 SPRYD4Q8WW59 207 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-209ENST00000470026 PAWRQ96IZ0 340 aaKnown RBP12.75□□□□□ -0.37
BRCA1-209ENST00000470026 UBL7Q96S82 380 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-209ENST00000470026 TMEM43Q9BTV4 400 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 TRAF4Q9BUZ4 470 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-209ENST00000470026 YIPF2Q9BWQ6 316 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 TRIM45Q9H8W5 580 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-209ENST00000470026 RANGRFQ9HD47 186 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-209ENST00000470026 HINT3Q9NQE9 182 aaKnown RBP12.75□□□□□ -0.37
BRCA1-209ENST00000470026 NLGN3Q9NZ94 848 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 COMMD3Q9UBI1 195 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 SERGEFQ9UGK8 458 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 ZNF443Q9Y2A4 671 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-209ENST00000470026 NTNG1Q9Y2I2 539 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 PLEKHM1Q9Y4G2 1056 aa12.75□□□□□ -0.37
BRCA1-209ENST00000470026 OR52A4PA6NMU1 304 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 AGR2O95994 175 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 SLC2A2P11168 524 aaPredicted RBP12.74□□□□□ -0.37
BRCA1-209ENST00000470026 ALAS2P22557 587 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 RAB8AP61006 207 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 MRPS15P82914 257 aaKnown RBP12.74□□□□□ -0.37
BRCA1-209ENST00000470026 DAB2P98082 770 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 P2RY14Q15391 338 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 LTB4RQ15722 352 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 RPE65Q16518 533 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 YIF1BQ5BJH7 314 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 C16orf62Q7Z3J2 963 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 Q8N402 240 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 BBS1Q8NFJ9 593 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 NEIL3Q8TAT5 605 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 BRIX1Q8TDN6 353 aaKnown RBP12.74□□□□□ -0.37
BRCA1-209ENST00000470026 SCARF2Q96GP6 870 aaPredicted RBP12.74□□□□□ -0.37
BRCA1-209ENST00000470026 DMRTB1Q96MA1 342 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 RIPOR3Q96MK2 946 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 MS4A4EQ96PG1 132 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 C1QTNF2Q9BXJ5 285 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 SLA2Q9H6Q3 261 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 KIR3DX1Q9H7L2 352 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 MTHFD2LQ9H903 347 aaPredicted RBP12.74□□□□□ -0.37
BRCA1-209ENST00000470026 B3GAT2Q9NPZ5 323 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 EQTNQ9NQ60 294 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 KLHL21Q9UJP4 597 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 ZNF780BQ9Y6R6 833 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 TBC1D3KA0A087X1G2 549 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 TBC1D3FA6NER0 549 aaPredicted RBP12.74□□□□□ -0.37
BRCA1-209ENST00000470026 CH25HO95992 272 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 PAK4O96013 591 aaPredicted RBP12.74□□□□□ -0.37
BRCA1-209ENST00000470026 ASGR2P07307 311 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 NDUFV2P19404 249 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 CELP19835 753 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 C5AR1P21730 350 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 FCARP24071 287 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 CMPK1P30085 196 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 GPR4P46093 362 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 AVPR1BP47901 424 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 RNF144AP50876 292 aaPredicted RBP12.74□□□□□ -0.37
BRCA1-209ENST00000470026 ZNF136P52737 540 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 LRRC32Q14392 662 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 PUS10Q3MIT2 529 aaKnown RBP12.74□□□□□ -0.37
BRCA1-209ENST00000470026 EXOSC6Q5RKV6 272 aaKnown RBP12.74□□□□□ -0.37
BRCA1-209ENST00000470026 TBC1D3GQ6DHY5 549 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 MZT2AQ6P582 158 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 FAM111BQ6SJ93 734 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 VN1R4Q7Z5H5 301 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 SPRED2Q7Z698 418 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 PAQR7Q86WK9 346 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 TMEM145Q8NBT3 493 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 OR2T33Q8NG76 320 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 OR7G2Q8NG99 324 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 ENKURQ8TC29 256 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 ADAMTS15Q8TE58 950 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 TMEM255BQ8WV15 326 aa12.74□□□□□ -0.37
BRCA1-209ENST00000470026 KAT2AQ92830 837 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms