RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 FEVQ99581 238 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 G6PC3Q9BUM1 346 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 SLC39A1Q9NY26 324 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 ACAD8Q9UKU7 415 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 CBLCQ9ULV8 474 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 A4GNTQ9UNA3 340 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 CHST2Q9Y4C5 530 aa17.58■□□□□ 0.41
SMC4-209ENST00000468653 ZNF318Q5VUA4 2279 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 CENPVL1A0A0U1RR11 272 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 CLDN24A6NM45 220 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 IDSB3KWA1 339 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 FRS3O43559 492 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 GUSBP08236 651 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 ANXA8P13928 327 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 NID1P14543 1247 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 PIGAP37287 484 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 RGS8P57771 180 aaPredicted RBP17.58■□□□□ 0.4
SMC4-209ENST00000468653 FOXL2P58012 376 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 EEF1A1P68104 462 aaKnown RBP17.58■□□□□ 0.4
SMC4-209ENST00000468653 NPTX1Q15818 432 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 MAPK14Q16539 360 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 TMEM154Q6P9G4 183 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 ISLR2Q6UXK2 745 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 ZAR1Q86SH2 424 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 OFCC1Q8IZS5 231 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 PIK3C3Q8NEB9 887 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 DHRS1Q96LJ7 313 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 PRRC1Q96M27 445 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 CDC6Q99741 560 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 RIBC2Q9H4K1 309 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 ARMC7Q9H6L4 198 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 COPS7AQ9UBW8 275 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 SCOCQ9UIL1 159 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 CACNA1HO95180 2353 aa17.58■□□□□ 0.4
SMC4-209ENST00000468653 CBFA2T3O75081 653 aa17.57■□□□□ 0.4
SMC4-209ENST00000468653 IGKV1D-16P01601 117 aa17.57■□□□□ 0.4
SMC4-209ENST00000468653 IGKV3-11P04433 115 aa17.57■□□□□ 0.4
SMC4-209ENST00000468653 KLK3P07288 261 aaPredicted RBP17.57■□□□□ 0.4
SMC4-209ENST00000468653 CCNYL3P0C7X3 344 aa17.57■□□□□ 0.4
SMC4-209ENST00000468653 FUT4P22083 530 aa17.57■□□□□ 0.4
SMC4-209ENST00000468653 E2F1Q01094 437 aa17.57■□□□□ 0.4
SMC4-209ENST00000468653 DCST1Q5T197 706 aa17.57■□□□□ 0.4
SMC4-209ENST00000468653 METTL21AQ8WXB1 218 aa17.57■□□□□ 0.4
SMC4-209ENST00000468653 NUDT9Q9BW91 350 aa17.57■□□□□ 0.4
SMC4-209ENST00000468653 STRADBQ9C0K7 418 aa17.57■□□□□ 0.4
SMC4-209ENST00000468653 PNPLA3Q9NST1 481 aa17.57■□□□□ 0.4
SMC4-209ENST00000468653 KCNE5Q9UJ90 142 aa17.57■□□□□ 0.4
SMC4-209ENST00000468653 TRBV4-1A0A0J9YWV2 114 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 C4orf47A7E2U8 309 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 AP3D1O14617 1153 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 TNFAIP8O95379 198 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 ZNF28P17035 718 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 IFNA8P32881 189 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 PPICP45877 212 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 EMP2P54851 167 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 TPD52P55327 224 aaPredicted RBP17.56■□□□□ 0.4
SMC4-209ENST00000468653 TAS2R41P59536 307 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 MYBPC1Q00872 1141 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 BLMHQ13867 455 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 MRPL2Q5T653 305 aaKnown RBP17.56■□□□□ 0.4
SMC4-209ENST00000468653 AP1ARQ63HQ0 302 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 LCN10Q6JVE6 187 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 USP51Q70EK9 711 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 BCORP1Q8N888 145 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 OR9Q2Q8NGE9 314 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 NR4A3Q92570 626 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 MUS81Q96NY9 551 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 ULBP3Q9BZM4 244 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 ZNF556Q9HAH1 456 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 CTPS2Q9NRF8 586 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 LOC100130705A0A1B0GUX0 176 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 VSTM2BA6NLU5 285 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 B4E171 279 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 ALOX12BO75342 701 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 RFPL3O75679 317 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 SEC24DO94855 1032 aaPredicted RBP17.56■□□□□ 0.4
SMC4-209ENST00000468653 ITGAMP11215 1152 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 ELAVL4P26378 380 aaKnown RBP17.56■□□□□ 0.4
SMC4-209ENST00000468653 POLR2IP36954 125 aaKnown RBP17.56■□□□□ 0.4
SMC4-209ENST00000468653 TSPAN7P41732 249 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 ILKQ13418 452 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 RNF220Q5VTB9 566 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 ANKRD37Q7Z713 158 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 ZNF614Q8N883 585 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 MORN4Q8NDC4 146 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 PRR14Q9BWN1 585 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 PAPOLBQ9NRJ5 636 aaKnown RBP17.56■□□□□ 0.4
SMC4-209ENST00000468653 NCDNQ9UBB6 729 aa17.56■□□□□ 0.4
SMC4-209ENST00000468653 GPN3Q9UHW5 284 aaPredicted RBP17.56■□□□□ 0.4
SMC4-209ENST00000468653 MYO15AQ9UKN7 3530 aa17.55■□□□□ 0.4
SMC4-209ENST00000468653 A0A1W2PRQ8 180 aa17.55■□□□□ 0.4
SMC4-209ENST00000468653 ARRDC5A6NEK1 342 aa17.55■□□□□ 0.4
SMC4-209ENST00000468653 CPSF4LA6NMK7 179 aaKnown RBP17.55■□□□□ 0.4
SMC4-209ENST00000468653 FAAHO00519 579 aa17.55■□□□□ 0.4
SMC4-209ENST00000468653 TPST2O60704 377 aa17.55■□□□□ 0.4
SMC4-209ENST00000468653 UGT2B11O75310 529 aa17.55■□□□□ 0.4
SMC4-209ENST00000468653 CYP4B1P13584 511 aa17.55■□□□□ 0.4
SMC4-209ENST00000468653 RNF144AP50876 292 aaPredicted RBP17.55■□□□□ 0.4
SMC4-209ENST00000468653 HOXC5Q00444 222 aa17.55■□□□□ 0.4
SMC4-209ENST00000468653 DGCR6Q14129 220 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms